RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 THTPAQ9BU02 230 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 MTMR12Q9C0I1 747 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 DHX35Q9H5Z1 703 aaKnown RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 DNPEPQ9ULA0 475 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 UBTFL6P0CB48 400 aaPredicted RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 FECHP22830 423 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 RAP1GAPP47736 663 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 BCAR1P56945 870 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 AMHR2Q16671 573 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 SLC25A41Q8N5S1 370 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 AGAP11Q8TF27 550 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 MPHOSPH6Q99547 160 aaKnown RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 RPF1Q9H9Y2 349 aaKnown RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 PCMTD2Q9NV79 361 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 XPO7Q9UIA9 1087 aaKnown RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 BAZ2AQ9UIF9 1905 aaKnown RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 CREB3O43889 395 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 BMPR2Q13873 1038 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 EXOC3L1Q86VI1 746 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.16
CASC4-201ENST00000299957 NUDCD3Q8IVD9 361 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 ARID3BQ8IVW6 561 aaPredicted RBP14.02□□□□□ -0.16
CASC4-201ENST00000299957 NETO2Q8NC67 525 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 TRIM4Q9C037 500 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 HERC5Q9UII4 1024 aaKnown RBP14.02□□□□□ -0.16
CASC4-201ENST00000299957 R3HDM2Q9Y2K5 976 aaKnown RBP14.02□□□□□ -0.16
CASC4-201ENST00000299957 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
CASC4-201ENST00000299957 CFAP73A6NFT4 308 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 F8VP50 259 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 H3BRJ5 948 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 PEX10O60683 326 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 ITGB5P18084 799 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 DRD4P21917 467 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 CIAPIN1Q6FI81 312 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 TTC27Q6P3X3 843 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 MFSD7Q6UXD7 560 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 SLC26A7Q8TE54 656 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 FAM81BQ96LP2 452 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 TSC22D3Q99576 134 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 DLGAP2Q9P1A6 1054 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 HEY2Q9UBP5 337 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 M0R2N6 131 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 LGR5O75473 907 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 ZCCHC18P0CG32 403 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 PECAM1P16284 738 aaPredicted RBP14.02□□□□□ -0.17
CASC4-201ENST00000299957 PGM1P36871 562 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 RGS9BPQ6ZS82 235 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 ATP11CQ8NB49 1132 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 TSSK1BQ9BXA7 367 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 SCOCQ9UIL1 159 aa14.02□□□□□ -0.17
CASC4-201ENST00000299957 IQANK1A0A1B0GTG1 560 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 SKIP12755 728 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 EPHB2P29323 1055 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
CASC4-201ENST00000299957 CDH8P55286 799 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 SLC8A3P57103 927 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 ELF3P78545 371 aaPredicted RBP14.01□□□□□ -0.17
CASC4-201ENST00000299957 ARMC2Q8NEN0 867 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 SEMA4DQ92854 862 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 HES6Q96HZ4 224 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 ZDHHC15Q96MV8 337 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 CEP41Q9BYV8 373 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 H0YCG3 227 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 MAP3K7O43318 606 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 KRT37O76014 449 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 ADRA2BP18089 450 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 TFDP1Q14186 410 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 ASTE1Q2TB18 679 aaPredicted RBP14.01□□□□□ -0.17
CASC4-201ENST00000299957 ERMARDQ5T6L9 678 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 ACTL9Q8TC94 416 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 SLC38A10Q9HBR0 1119 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 NINJ2Q9NZG7 142 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 CSADQ9Y600 493 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 IVNS1ABPQ9Y6Y0 642 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 B2RBV5 119 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 NEMP1O14524 444 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 STK10O94804 968 aaKnown RBP14.01□□□□□ -0.17
CASC4-201ENST00000299957 FSBPO95073 299 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 PDGFRBP09619 1106 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 PDGFRAP16234 1089 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 ADORA2BP29275 332 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 CNPY4Q8N129 248 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 PARD3BQ8TEW8 1205 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 RIT2Q99578 217 aa14.01□□□□□ -0.17
CASC4-201ENST00000299957 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
CASC4-201ENST00000299957 POLD1P28340 1107 aa14□□□□□ -0.17
CASC4-201ENST00000299957 PRKCIP41743 596 aa14□□□□□ -0.17
CASC4-201ENST00000299957 RPL7AP62424 266 aaKnown RBP14□□□□□ -0.17
CASC4-201ENST00000299957 ITKQ08881 620 aa14□□□□□ -0.17
CASC4-201ENST00000299957 Q4G0T1 1027 aa14□□□□□ -0.17
CASC4-201ENST00000299957 TAF1BQ53T94 588 aaPredicted RBP14□□□□□ -0.17
CASC4-201ENST00000299957 AP1ARQ63HQ0 302 aa14□□□□□ -0.17
CASC4-201ENST00000299957 DUPD1Q68J44 220 aa14□□□□□ -0.17
CASC4-201ENST00000299957 NAIF1Q69YI7 327 aaPredicted RBP14□□□□□ -0.17
CASC4-201ENST00000299957 RSPH3Q86UC2 560 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms