RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TBX10O75333 385 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 T-ENOLP0DO92 83 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SSTR1P30872 391 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 GCLCP48506 637 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 PRELPP51888 382 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 DYNC1I2Q13409 638 aaKnown RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SLC10A5Q5PT55 438 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 ACAD10Q6JQN1 1059 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 RHOT1Q8IXI2 618 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 RIBC1Q8N443 379 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 BORCS6Q96GS4 357 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 TTC25Q96NG3 672 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 FHDC1Q9C0D6 1143 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SMYD3Q9H7B4 428 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 C1orf112Q9NSG2 853 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 NDE1Q9NXR1 346 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 CCDC195A0A1B0GUA6 201 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 LPXNO60711 386 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 GSTA2P09210 222 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 TNNI1P19237 187 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 LMNB2Q03252 620 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SIX1Q15475 284 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 SYDE2Q5VT97 1194 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 RHPN2Q8IUC4 686 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 POMGNT1Q8WZA1 660 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 EZH1Q92800 747 aaPredicted RBP12.05□□□□□ -0.48
TRUB1-201ENST00000298746 GORASP1Q9BQQ3 440 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 HOMER2Q9NSB8 354 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 USP20Q9Y2K6 914 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 WASF2Q9Y6W5 498 aa12.05□□□□□ -0.48
TRUB1-201ENST00000298746 FRMPD4Q14CM0 1322 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 PYGLP06737 847 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 SNHG28P0DPA3 235 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 CCNG1P51959 295 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 PPP2R5CQ13362 524 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 KRT39Q6A163 491 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 C3orf62Q6ZUJ4 267 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 HAUS6Q7Z4H7 955 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 CCDC110Q8TBZ0 833 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 C10orf82Q8WW14 230 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ZNF184Q99676 751 aaPredicted RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 HERPUD2Q9BSE4 406 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TUBB6Q9BUF5 446 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 LGALS13Q9UHV8 139 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 MYH11P35749 1972 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ATP8B3O60423 1300 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TLR3O15455 904 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 GSC2O15499 205 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TJP3O95049 919 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 MYL2P10916 166 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 INHBEP58166 350 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 YWHAGP61981 247 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 IRX4P78413 519 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ATP13A4Q4VNC1 1196 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 ISLR2Q6UXK2 745 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TAS1R2Q8TE23 839 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 CCDC124Q96CT7 223 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 FAM111AQ96PZ2 611 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 CENPKQ9BS16 269 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 DNPEPQ9ULA0 475 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 CYP3A7-CYP3A51PA0A087WV96 503 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 PFDN1O60925 122 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 CYP3A7P24462 503 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 SREBF1P36956 1147 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TFDP1Q14186 410 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 MAPK6Q16659 721 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 HIF1AQ16665 826 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 RHBDF2Q6PJF5 856 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 USP37Q86T82 979 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 P2RX7Q99572 595 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 EPAS1Q99814 870 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 SYT11Q9BT88 431 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 MAK16Q9BXY0 300 aaKnown RBP12.04□□□□□ -0.48
TRUB1-201ENST00000298746 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
TRUB1-201ENST00000298746 C2CD2LO14523 706 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 CYP1A2P05177 515 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 INHBAP08476 426 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 SHMT1P34896 483 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 EPHB1P54762 984 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 HADHBP55084 474 aaKnown RBP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 SP4Q02446 784 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 NFIAQ12857 509 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms