RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ACO1P21399 889 aaKnown RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 ALDH5A1P51649 535 aaPredicted RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 ZACNQ401N2 412 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 USP37Q86T82 979 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 RHOT1Q8IXI2 618 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 SAMD3Q8N6K7 520 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 GIMAP7Q8NHV1 300 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 TIPINQ9BVW5 301 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 CXorf56Q9H5V9 222 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 SAE1Q9UBE0 346 aaPredicted RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 AGO2Q9UKV8 859 aaKnown RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 ZNF148Q9UQR1 794 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 SUN1O94901 812 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 NOMO3P69849 1222 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 C15orf39Q6ZRI6 1047 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 VSIG10LQ86VR7 867 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 C4orf33Q8N1A6 199 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 SPIRE2Q8WWL2 714 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 A1CFQ9NQ94 594 aaKnown RBP25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 AVENQ9NQS1 362 aaPredicted RBP25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 CRELD2Q6UXH1 353 aaPredicted RBP25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 N4BP2L2Q92802 583 aaPredicted RBP25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 FAM212AQ96EL1 285 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 IFT74Q96LB3 600 aa25.87■■□□□ 1.73
SPTSSA-201ENST00000298130 VWA5AO00534 786 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 ZBED4O75132 1171 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 KRT16P08779 473 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 KCNA2P16389 499 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 SLC1A1P43005 524 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 MAGEA4P43358 317 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 CXCL9Q07325 125 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 CUL2Q13617 745 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 SNRNP48Q6IEG0 339 aaKnown RBP25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 MFSD7Q6UXD7 560 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 RBBP8NLQ8NC74 664 aaPredicted RBP25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 RBAKQ9NYW8 714 aaPredicted RBP25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 MCM8Q9UJA3 840 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 TTLL13PA6NNM8 815 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 F8VP50 259 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 IFNB1P01574 187 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 KLHL29Q96CT2 875 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 SLCO1B3Q9NPD5 702 aa25.86■■□□□ 1.73
SPTSSA-201ENST00000298130 EXTL3O43909 919 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 GTF2H1P32780 548 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 WDR4P57081 412 aaKnown RBP25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 ACTR2P61160 394 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 FSTL1Q12841 308 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 DNAJC3Q13217 504 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 FAM83AQ86UY5 434 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 ASAP3Q8TDY4 903 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 ATP6V0A4Q9HBG4 840 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 NKIRAS1Q9NYS0 192 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 IVNS1ABPQ9Y6Y0 642 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 NQO1P15559 274 aaKnown RBP25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 POLGP54098 1239 aaPredicted RBP25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 GAD2Q05329 585 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 WLSQ5T9L3 541 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 LIN9Q5TKA1 542 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 ABRAQ8N0Z2 381 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 ATP6V0A1Q93050 837 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 JPH1Q9HDC5 661 aaPredicted RBP25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 FBXO40Q9UH90 709 aa25.85■■□□□ 1.73
SPTSSA-201ENST00000298130 EXOC1LA0A1B0GW35 172 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 DGAT1O75907 488 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 DYNLT1P63172 113 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 SP2Q02086 613 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 NFX1Q12986 1120 aaKnown RBP25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 NEDD9Q14511 834 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 CCNG2Q16589 344 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 TTLL6Q8N841 843 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 CCDC89Q8N998 374 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 SLC17A8Q8NDX2 589 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 AGAP11Q8TF27 550 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 KIAA1683Q9H0B3 1180 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ARHGAP28Q9P2N2 729 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 DOCK5Q9H7D0 1870 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 GARTP22102 1010 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 CCND2P30279 289 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 PLCB3Q01970 1234 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 GPS1Q13098 491 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ANKLE1Q8NAG6 615 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 LPAR1Q92633 364 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 LOXHD1Q8IVV2 1947 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 CDH16O75309 829 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 CST3P01034 146 aaPredicted RBP25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 KRT1P04264 644 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 GSTA1P08263 222 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 KLRC2P26717 231 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ATP5DP30049 168 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ARSEP51690 589 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 MYO1EQ12965 1108 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ENOSF1Q7L5Y1 443 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ANKMY2Q8IV38 441 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 TMEM130Q8N3G9 435 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 ZNF668Q96K58 619 aaPredicted RBP25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 MCEEQ96PE7 176 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 MYOZ2Q9NPC6 264 aa25.84■■□□□ 1.73
SPTSSA-201ENST00000298130 EZRP15311 586 aaKnown RBP25.83■■□□□ 1.73
SPTSSA-201ENST00000298130 PECAM1P16284 738 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms