RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 HERPUD2Q9BSE4 406 aa20.54■□□□□ 0.88
BRAF-201ENST00000288602 USTQ9Y2C2 406 aa20.54■□□□□ 0.88
BRAF-201ENST00000288602 IVNS1ABPQ9Y6Y0 642 aa20.54■□□□□ 0.88
BRAF-201ENST00000288602 MYBL1P10243 752 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 GJC1P36383 396 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 ZNF132P52740 706 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 PPFIA1Q13136 1202 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 SGSM1Q2NKQ1 1148 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 DPP9Q86TI2 863 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 C1orf54Q8WWF1 131 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 NIF3L1Q9GZT8 377 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 RAB17Q9H0T7 212 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 FAM114A2Q9NRY5 505 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 MEFVO15553 781 aaPredicted RBP20.53■□□□□ 0.88
BRAF-201ENST00000288602 NFICP08651 508 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 AP3M2P53677 418 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 PLTPP55058 493 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 PPARDQ03181 441 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 DHX9Q08211 1270 aaKnown RBP20.53■□□□□ 0.88
BRAF-201ENST00000288602 PTP4A2Q12974 167 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 GRM1Q13255 1194 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 ORC1Q13415 861 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 SNX1Q13596 522 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 CEP85LQ5SZL2 805 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 PNMA8AQ86V59 439 aaPredicted RBP20.53■□□□□ 0.88
BRAF-201ENST00000288602 CCDC105Q8IYK2 499 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 EIF1ADQ8N9N8 165 aaKnown RBP20.53■□□□□ 0.88
BRAF-201ENST00000288602 C1orf131Q8NDD1 294 aaKnown RBP20.53■□□□□ 0.88
BRAF-201ENST00000288602 XYLT2Q9H1B5 865 aa20.53■□□□□ 0.88
BRAF-201ENST00000288602 CHRNA3P32297 505 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 RPL7AP62424 266 aaKnown RBP20.52■□□□□ 0.88
BRAF-201ENST00000288602 DHX34Q14147 1143 aaKnown RBP20.52■□□□□ 0.88
BRAF-201ENST00000288602 LIN9Q5TKA1 542 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.52■□□□□ 0.88
BRAF-201ENST00000288602 TFAP2BQ92481 460 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 TRIM11Q96F44 468 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 C16orf70Q9BSU1 422 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 KATNBL1Q9H079 304 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 CENPHQ9H3R5 247 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 SSR1P43307 286 aaKnown RBP20.52■□□□□ 0.88
BRAF-201ENST00000288602 ASPAP45381 313 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 GTF2A2P52657 109 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 TAS2R40P59535 323 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 CLUL1Q15846 466 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 TMC3Q7Z5M5 1100 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 PPTC7Q8NI37 304 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 RPF1Q9H9Y2 349 aaKnown RBP20.52■□□□□ 0.88
BRAF-201ENST00000288602 TNFSF13BQ9Y275 285 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 ATP8A1Q9Y2Q0 1164 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 ANK1P16157 1881 aa20.52■□□□□ 0.88
BRAF-201ENST00000288602 LACTBL1A8MY62 500 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 TLR3O15455 904 aaKnown RBP20.51■□□□□ 0.87
BRAF-201ENST00000288602 COILP38432 576 aaPredicted RBP20.51■□□□□ 0.87
BRAF-201ENST00000288602 CDH8P55286 799 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 PPP2R5EQ16537 467 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 SKIDA1Q1XH10 827 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 TRIM72Q6ZMU5 477 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 PHF13Q86YI8 300 aaPredicted RBP20.51■□□□□ 0.87
BRAF-201ENST00000288602 ATG4AQ8WYN0 398 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 ANKRD36BP1Q96IX9 119 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 FMO2Q99518 471 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 HEMGNQ9BXL5 484 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 LRRC4CQ9HCJ2 640 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 VTA1Q9NP79 307 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 PROSCO94903 275 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 TNNC2P02585 160 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 STAG3L1P0CL83 205 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 RPL21P46778 160 aaKnown RBP20.51■□□□□ 0.87
BRAF-201ENST00000288602 HNRNPH2P55795 449 aaKnown RBP20.51■□□□□ 0.87
BRAF-201ENST00000288602 FBXO25Q8TCJ0 367 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 LRRC45Q96CN5 670 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 PTPN18Q99952 460 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 FAM118BQ9BPY3 351 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 ZDHHC18Q9NUE0 388 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 PCYOX1Q9UHG3 505 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 MTUS1Q9ULD2 1270 aa20.51■□□□□ 0.87
BRAF-201ENST00000288602 FAM187AA6NFU0 413 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 H3BRB1 525 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 ASAP2O43150 1006 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 ADCY6O43306 1168 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 HSPA6P17066 643 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 SMPD1P17405 629 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 FGFR4P22455 802 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 PHKA2P46019 1235 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 AMHR2Q16671 573 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 WDR72Q3MJ13 1102 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 JADE1Q6IE81 842 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 CCDC50Q8IVM0 306 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 DDX27Q96GQ7 796 aaKnown RBP20.5■□□□□ 0.87
BRAF-201ENST00000288602 TUT1Q9H6E5 874 aaKnown RBP20.5■□□□□ 0.87
BRAF-201ENST00000288602 KLHL11Q9NVR0 708 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 SIX4Q9UIU6 781 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 B4GALT4O60513 344 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 TCF4P15884 667 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 ACTN2P35609 894 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 ATP1A2P50993 1020 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 SURF1Q15526 300 aa20.5■□□□□ 0.87
BRAF-201ENST00000288602 PLEKHA7Q6IQ23 1121 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms