RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MPZL3Q6UWV2 235 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ARHGAP18Q8N392 663 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ATP1A1P05023 1023 aaKnown RBP19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ACO1P21399 889 aaKnown RBP19.47■□□□□ 0.71
PCDH1-201ENST00000287008 NPTX2P47972 431 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 GRB10Q13322 594 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ARHGEF7Q14155 803 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 TDRD10Q5VZ19 366 aaKnown RBP19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ADGRA1Q86SQ6 560 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ELAC2Q9BQ52 826 aaKnown RBP19.47■□□□□ 0.71
PCDH1-201ENST00000287008 ANP32DO95626 131 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 PDK1Q15118 436 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 FAM163AQ96GL9 167 aaPredicted RBP19.47■□□□□ 0.71
PCDH1-201ENST00000287008 SLC13A1Q9BZW2 595 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 SNX12Q9UMY4 172 aa19.47■□□□□ 0.71
PCDH1-201ENST00000287008 SEZ6Q53EL9 994 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 MTHFD1LQ6UB35 978 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 ZC3H15Q8WU90 426 aaKnown RBP19.46■□□□□ 0.71
PCDH1-201ENST00000287008 ABHD16BQ9H3Z7 469 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 RSAD1Q9HA92 442 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 TSR3Q9UJK0 312 aaKnown RBP19.46■□□□□ 0.71
PCDH1-201ENST00000287008 LRRIQ1Q96JM4 1722 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 DCTN3O75935 186 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 GPD1P21695 349 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 HADHAP40939 763 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 TWF1Q12792 350 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 LAMB3Q13751 1172 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 UGP2Q16851 508 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 OSBPL8Q9BZF1 889 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 ADM5C9JUS6 153 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 FOXP2O15409 715 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 MYO1DO94832 1006 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 AKT1P31749 480 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 KLHDC7AQ5VTJ3 777 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 SDE2Q6IQ49 451 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 C4orf19Q8IY42 314 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 CNPY4Q8N129 248 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 KRT35Q92764 455 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 YME1L1Q96TA2 773 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 CYTH2Q99418 400 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 PREX1Q8TCU6 1659 aa19.46■□□□□ 0.71
PCDH1-201ENST00000287008 SYDE1Q6ZW31 735 aaPredicted RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 NUDCD3Q8IVD9 361 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 H7C4K7 107 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 SMIM24O75264 130 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 GARTP22102 1010 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 NR1I3Q14994 352 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 NCAPHQ15003 741 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 CYP4A22Q5TCH4 519 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 VTNP04004 478 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 HIST1H2AGP0C0S8 130 aaPredicted RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 SLC2A3P11169 496 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 HIST1H2ADP20671 130 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 BRD2P25440 801 aaKnown RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 MAGOHP61326 146 aaKnown RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 EPC2Q52LR7 807 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 USP50Q70EL3 339 aaPredicted RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 MRPS31Q92665 395 aaKnown RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 NCLNQ969V3 563 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 HIST1H2AHQ96KK5 128 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 RMDN2Q96LZ7 410 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 HIST1H2AJQ99878 128 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 H2AFJQ9BTM1 129 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 PPATQ06203 517 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 CUL2Q13617 745 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 ARHGEF26Q96DR7 871 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 THOC1Q96FV9 657 aaKnown RBP19.45■□□□□ 0.7
PCDH1-201ENST00000287008 ATP11BQ9Y2G3 1177 aa19.45■□□□□ 0.7
PCDH1-201ENST00000287008 TMEM253P0C7T8 217 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 PNMA6AP0CW24 399 aaPredicted RBP19.44■□□□□ 0.7
PCDH1-201ENST00000287008 RBP3P10745 1247 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 MDM2Q00987 491 aaPredicted RBP19.44■□□□□ 0.7
PCDH1-201ENST00000287008 CCDC15Q0P6D6 951 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 BOLA3Q53S33 107 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 CBWD2Q8IUF1 395 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 PPP1R2P1Q96PQ5 205 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 P2RX7Q99572 595 aaKnown RBP19.44■□□□□ 0.7
PCDH1-201ENST00000287008 SLC7A5P2Q9GIP4 190 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 KIAA1257Q9ULG3 409 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 VWA5AO00534 786 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 MTSS1O43312 755 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 AP1G2O75843 785 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 URODP06132 367 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 THP07101 528 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 GFAPP14136 432 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 ATP8B4Q8TF62 1192 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 KRT82Q9NSB4 513 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 TRIM33Q9UPN9 1127 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 CFAP99D6REC4 459 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 PAN2Q504Q3 1202 aaKnown RBP19.44■□□□□ 0.7
PCDH1-201ENST00000287008 ATXN7L3BQ96GX2 97 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 CCDC138Q96M89 665 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 DDIT4Q9NX09 232 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 ZC3H11AO75152 810 aaKnown RBP eCLIP19.44■□□□□ 0.7
PCDH1-201ENST00000287008 EPHB2P29323 1055 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 OAZ1P54368 228 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 CASP7P55210 303 aa19.44■□□□□ 0.7
PCDH1-201ENST00000287008 APOBEC3HQ6NTF7 200 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms