RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 KRT76Q01546 638 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
SMC2-201ENST00000286398 SGSM1Q2NKQ1 1148 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 LMBRD2Q68DH5 695 aaPredicted RBP9.51□□□□□ -0.89
SMC2-201ENST00000286398 METTL16Q86W50 562 aaKnown RBP9.51□□□□□ -0.89
SMC2-201ENST00000286398 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 TSPAN17Q96FV3 270 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 C17orf80Q9BSJ5 609 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 CEP44Q9C0F1 390 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 CYLDQ9NQC7 956 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 AGPAT5Q9NUQ2 364 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 ITGB1BP2Q9UKP3 347 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 HPS5Q9UPZ3 1129 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 ITIH6Q6UXX5 1313 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 SAC3D1A6NKF1 404 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 CYP26A1O43174 497 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 BCL10O95999 233 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 SRGNP10124 158 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 KCNJ1P48048 391 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 KIZQ2M2Z5 673 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 PROSER3Q2NL68 480 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 RNF219Q5W0B1 726 aaPredicted RBP9.51□□□□□ -0.89
SMC2-201ENST00000286398 RCSD1Q6JBY9 416 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 CATSPER4Q7RTX7 472 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 KCNB2Q92953 911 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 SIK2Q9H0K1 926 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 APPL1Q9UKG1 709 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 DSEQ9UL01 958 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
SMC2-201ENST00000286398 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 HUS1O60921 280 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 KCNB1Q14721 858 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 FRMD5Q7Z6J6 570 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 SCN4BQ8IWT1 228 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 SERPINB12Q96P63 405 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ECSITQ9BQ95 431 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 SENP7Q9BQF6 1050 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 DDX18Q9NVP1 670 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 DKK3Q9UBP4 350 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 SYCP2Q9BX26 1530 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 GPATCH8Q9UKJ3 1502 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 ARHGAP31Q2M1Z3 1444 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 C3orf70A6NLC5 250 aaPredicted RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 PRPF4O43172 522 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMC2-201ENST00000286398 GUCY1B2O75343 617 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 MTRF1O75570 445 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 LCA5LO95447 670 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ATP6V1G2O95670 118 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 NME3Q13232 169 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 COG2Q14746 738 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 PKN3Q6P5Z2 889 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 KLHL4Q9C0H6 718 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ZCWPW1Q9H0M4 648 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 CFAP99D6REC4 459 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 UBOX5O94941 541 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ITGA8P53708 1063 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ADARP55265 1226 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 MAPK11Q15759 364 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ZNF568Q3ZCX4 644 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ARMC3Q5W041 872 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 FAM45BPQ6NSW5 357 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 NYAP1Q6ZVC0 841 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ARHGEF26Q96DR7 871 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 PNKPQ96T60 521 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 TRPC7Q9HCX4 862 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 TOPORSQ9NS56 1045 aaPredicted RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 ARHGEF38Q9NXL2 777 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 FHOD1Q9Y613 1164 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 ADGRA3Q8IWK6 1321 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 SASH1O94885 1247 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 MTM1Q13496 603 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 UXS1Q8NBZ7 420 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 APPL2Q8NEU8 664 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 PTPRN2Q92932 1015 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 MIEF2Q96C03 454 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 FAM20AQ96MK3 541 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 REXO4Q9GZR2 422 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 RERGLQ9H628 205 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 MRPL39Q9NYK5 338 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 LRCH1Q9Y2L9 728 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 MYO3BQ8WXR4 1341 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 POTEFA5A3E0 1075 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 FKBP6O75344 327 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 POTEIP0CG38 1075 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 PRELPP51888 382 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 PTPN12Q05209 780 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMC2-201ENST00000286398 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 POTEEQ6S8J3 1075 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 STRBPQ96SI9 672 aaKnown RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 AP5M1Q9H0R1 490 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 DMAP1Q9NPF5 467 aaPredicted RBP9.5□□□□□ -0.89
SMC2-201ENST00000286398 ATAD3AQ9NVI7 634 aa9.5□□□□□ -0.89
SMC2-201ENST00000286398 E2F8A0AVK6 867 aa9.49□□□□□ -0.89
SMC2-201ENST00000286398 PIPSLA2A3N6 862 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms