RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 KREMEN1Q96MU8 473 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 NT5C1BQ96P26 610 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 RAD9AQ99638 391 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 UBE2TQ9NPD8 197 aaPredicted RBP23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 NXF1Q9UBU9 619 aaKnown RBP23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 PRG3Q9Y2Y8 225 aaPredicted RBP23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 KPNA7A9QM74 516 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 ALDH2P05091 517 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 TRIM21P19474 475 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 ASPAP45381 313 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 TAF6P49848 677 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 POLR2FP61218 127 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 MYO1EQ12965 1108 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 DCLRE1AQ6PJP8 1040 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 PPM1KQ8N3J5 372 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 SPC24Q8NBT2 197 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 NEK11Q8NG66 645 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 IMPG2Q9BZV3 1241 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 R3HCC1Q9Y3T6 440 aaKnown RBP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 AARSP49588 968 aaKnown RBP eCLIP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 FXR1P51114 621 aaKnown RBP eCLIP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 BCAR1P56945 870 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 TIGD5Q53EQ6 642 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 FIGNQ5HY92 759 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 ZNF667Q5HYK9 610 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 SP7Q8TDD2 431 aaPredicted RBP23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 CPLX3Q8WVH0 158 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 NLRC4Q9NPP4 1024 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 MARCH5Q9NX47 278 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 FBXL5Q9UKA1 691 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 DNAJC12Q9UKB3 198 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 SNX9Q9Y5X1 595 aa23.41■■□□□ 1.34
PDLIM3-203ENST00000284771 TLL1O43897 1013 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 MYOGP15173 224 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 CASP14P31944 242 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 PNPLA4P41247 253 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 BRCC3P46736 316 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 BCL7CQ8WUZ0 217 aaPredicted RBP23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 ZNF560Q96MR9 790 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 TMEM175Q9BSA9 504 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 GPR88Q9GZN0 384 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 SDCBP2Q9H190 292 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 GDAP2Q9NXN4 497 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 FAN1Q9Y2M0 1017 aa23.4■■□□□ 1.34
PDLIM3-203ENST00000284771 I3L4J1 428 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 BMP8BP34820 402 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 CDH8P55286 799 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 GCNT1Q02742 428 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 GOLGA8FQ08AF8 430 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 GOLGA8DPQ0D2H9 430 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 CUL2Q13617 745 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 CCDC150Q8NCX0 1101 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 BAP1Q92560 729 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 PDLIM2Q96JY6 352 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 BCO2Q9BYV7 579 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 NIF3L1Q9GZT8 377 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 GBF1Q92538 1859 aa23.39■■□□□ 1.34
PDLIM3-203ENST00000284771 TMEM189-UBE2V1I3L0A0 370 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 CLSTN1O94985 981 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 WEE2P0C1S8 567 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 SOWAHAQ2M3V2 549 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 SV2CQ496J9 727 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 LIMS2Q7Z4I7 341 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 DRC7Q8IY82 874 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 NUP58Q9BVL2 599 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 SMYD3Q9H7B4 428 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 CEP72Q9P209 647 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 CAPN11Q9UMQ6 739 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 KIAA1671Q9BY89 1806 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 ARHGEF15O94989 841 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 RAP1GAPP47736 663 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 ALDH7A1P49419 539 aaKnown RBP23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 ARHGAP44Q17R89 818 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 KCNT2Q6UVM3 1135 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 SCARA5Q6ZMJ2 495 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 SENP8Q96LD8 212 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 CDH23Q9H251 3354 aa23.38■■□□□ 1.33
PDLIM3-203ENST00000284771 PNMA6AP0CW24 399 aaPredicted RBP23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 ACO1P21399 889 aaKnown RBP23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 JAM2P57087 298 aa23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 FIBCD1Q8N539 461 aa23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 UBR7Q8N806 425 aa23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 CLP1Q92989 425 aaKnown RBP23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 MMS19Q96T76 1030 aa23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 PRO3102Q9H379 93 aa23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 ADAM28Q9UKQ2 775 aa23.37■■□□□ 1.33
PDLIM3-203ENST00000284771 A0A1W2PQJ5 194 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 FOXN3O00409 490 aaPredicted RBP23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 EFEMP2O95967 443 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 ADKP55263 362 aaKnown RBP23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 RAPGEF1Q13905 1077 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 DRAP1Q14919 205 aaPredicted RBP23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 SPOUT1Q5T280 376 aaKnown RBP23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 SPRED2Q7Z698 418 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 FAXDC2Q96IV6 333 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 STK33Q9BYT3 514 aa23.36■■□□□ 1.33
PDLIM3-203ENST00000284771 GPR62Q9BZJ7 368 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms