RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TTC3P53804 2025 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 SOWAHDA6NJG2 315 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 FOXN3O00409 490 aaPredicted RBP20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 RPL9P32969 192 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 SOX5P35711 763 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 PNPLA4P41247 253 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 FPGSQ05932 587 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 TUSC3Q13454 348 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 CYP26C1Q6V0L0 522 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 FMNL3Q8IVF7 1028 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 ABI1Q8IZP0 508 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 RSPH1Q8WYR4 309 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 SHC3Q92529 594 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 ARID3AQ99856 593 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 NXF1Q9UBU9 619 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 BAIAP3O94812 1187 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 P4HA1P13674 534 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 ASPAP45381 313 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 CDK17Q00537 523 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 MTF1Q14872 753 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 RAD9BQ6WBX8 426 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 C16orf59Q7L2K0 433 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 ZNF560Q96MR9 790 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 CASD1Q96PB1 797 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 CHP1Q99653 195 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 SPTLC3Q9NUV7 552 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 MICAL3Q7RTP6 2002 aa20.28■□□□□ 0.84
PDLIM3-202ENST00000284770 PNMA6AP0CW24 399 aaPredicted RBP20.27■□□□□ 0.84
PDLIM3-202ENST00000284770 DDX27Q96GQ7 796 aaKnown RBP20.27■□□□□ 0.84
PDLIM3-202ENST00000284770 TBC1D13Q9NVG8 400 aa20.27■□□□□ 0.84
PDLIM3-202ENST00000284770 CASTOR2A6NHX0 329 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 AMHP03971 560 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 TAF6P49848 677 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 CLCNKBP51801 687 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 UPP1Q16831 310 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 SMYD5Q6GMV2 418 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 IRF2BP2Q7Z5L9 587 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 FAM71AQ8IYT1 594 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 TOP1MTQ969P6 601 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 UROC1Q96N76 676 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 BCO2Q9BYV7 579 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 LTBP2Q14767 1821 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 PODXLO00592 558 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 GFPT2O94808 682 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 UPP2O95045 317 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 FERP16591 822 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 SYN1P17600 705 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 ACO1P21399 889 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 LILRA4P59901 499 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 WDR5P61964 334 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 TNNC1P63316 161 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 ARID5AQ03989 594 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 DSC1Q08554 894 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 ASIC2Q16515 512 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 SV2CQ496J9 727 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 TOGARAM2Q6ZUX3 1019 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 OTOP2Q7RTS6 562 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 CCAR2Q8N163 923 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 DPF3Q92784 378 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 CACNG4Q9UBN1 327 aa20.26■□□□□ 0.83
PDLIM3-202ENST00000284770 USP27XA6NNY8 438 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 KPNA7A9QM74 516 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 DDHD2O94830 711 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 FGBP02675 491 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 SERPING1P05155 500 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 CCDC172P0C7W6 258 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 GATMP50440 423 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 RNASELQ05823 741 aaKnown RBP20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 HGSNATQ68CP4 663 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 ZNF365Q70YC5 407 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 ZNF280BQ86YH2 543 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 PAAF1Q9BRP4 392 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 MRPL9Q9BYD2 267 aaKnown RBP20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 CYP3A43Q9HB55 503 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 GDAP2Q9NXN4 497 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 SNX9Q9Y5X1 595 aa20.25■□□□□ 0.83
PDLIM3-202ENST00000284770 SPTLC1O15269 473 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 DGKIO75912 1065 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 WEE2P0C1S8 567 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 USP8P40818 1118 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 PRKCIP41743 596 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 YWHAEP62258 255 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 SCARA5Q6ZMJ2 495 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 GPIHBP1Q8IV16 184 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 COLGALT2Q8IYK4 626 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 UBR7Q8N806 425 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 FAM193BQ96PV7 902 aaPredicted RBP20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 MMS19Q96T76 1030 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 FAM124BQ9H5Z6 455 aaPredicted RBP20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 CISHQ9NSE2 258 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 ARHGAP20Q9P2F6 1191 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 ZMYND8Q9ULU4 1186 aaPredicted RBP20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 CNTN6Q9UQ52 1028 aa20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 BZW2Q9Y6E2 419 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-202ENST00000284770 TBKBP1A7MCY6 615 aa20.23■□□□□ 0.83
PDLIM3-202ENST00000284770 DEFB103AP81534 67 aa20.23■□□□□ 0.83
PDLIM3-202ENST00000284770 KLHL30Q0D2K2 578 aa20.23■□□□□ 0.83
PDLIM3-202ENST00000284770 PSRC1Q6PGN9 363 aaPredicted RBP20.23■□□□□ 0.83
PDLIM3-202ENST00000284770 SMYD3Q9H7B4 428 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms