RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RPS6KB2Q9UBS0 482 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ECDO95905 644 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ALOX15P16050 662 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RGS2P41220 211 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ATP12AP54707 1039 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 POU4F1Q01851 419 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 BYSLQ13895 437 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SGSM1Q2NKQ1 1148 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SLC25A24Q6NUK1 477 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 OR8H2Q8N162 312 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 TTLL4Q14679 1199 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SFR1Q86XK3 245 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 APOL5Q9BWW9 433 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SIK2Q9H0K1 926 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MARCOQ9UEW3 520 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MOCS2O96007 188 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 PSMC3P17980 439 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 VAMP7P51809 220 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 APBA3O96018 575 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 FAM9CQ8IZT9 166 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF496Q96IT1 587 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 CAMKK2Q96RR4 588 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MAPKAPK2P49137 400 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 TTC39BQ5VTQ0 682 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RAD54LQ92698 747 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 CNTRLQ7Z7A1 2325 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 CYP2D7A0A087X1C5 515 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 IFNAR1P17181 557 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 KLHL12Q53G59 568 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 PMF1Q6P1K2 205 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF786Q8N393 782 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RMDN3Q96TC7 470 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 HDHD2Q9H0R4 259 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 DDX47Q9H0S4 455 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ABCB11O95342 1321 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 FTLP02792 175 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 GUCY1A2P33402 732 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SPRP35270 261 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 LRRC14Q15048 493 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 PDK1Q15118 436 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SMAD1Q15797 465 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 GSTA3Q16772 222 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 CDC73Q6P1J9 531 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 TRPM8Q7Z2W7 1104 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RMND5AQ9H871 391 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 TUFT1Q9NNX1 390 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SPASTQ9UBP0 616 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 RCOR1Q9UKL0 485 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 E7ENQ6 273 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 IL13P35225 146 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MAGEA10P43363 369 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 PHKA1P46020 1223 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SULT1E1P49888 294 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 PTK7Q13308 1070 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 OSBPL8Q9BZF1 889 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 INTS2Q9H0H0 1204 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ALG13Q9NP73 1137 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 NDUFA13Q9P0J0 144 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ESYT3A0FGR9 886 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 E9PBE3 544 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 DNALI1O14645 258 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PIK3R1P27986 724 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 LIFRP42702 1097 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 DRAP1Q14919 205 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TSC22D1Q15714 1073 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 C12orf60Q5U649 245 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ERAP2Q6P179 960 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 LINC00523Q86TU6 105 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TRIM48Q8IWZ4 208 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 OSBPL6Q9BZF3 934 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 TASP1Q9H6P5 420 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 IL1RL2Q9HB29 575 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ATP6V1B1P15313 513 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ITGA1P56199 1179 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 MRPS25P82663 173 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 PTPN12Q05209 780 aaKnown RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 SEMA3FQ13275 785 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF618Q5T7W0 954 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 MDM1Q8TC05 714 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ENKURQ8TC29 256 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 MED15Q96RN5 788 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 AVENQ9NQS1 362 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 LAMC1P11047 1609 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 APRTP07741 180 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 LCP1P13796 627 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 CPB1P15086 417 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 DENND6AQ8IWF6 608 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 THTPAQ9BU02 230 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 FEM1BQ9UK73 627 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ADORA1P30542 326 aa9.11□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF200P98182 395 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-201ENST00000282516 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms