RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MTMR12Q9C0I1 747 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 PHF24Q9UPV7 400 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 CES2O00748 559 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 HSPA1AP0DMV8 641 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 HSPA1BP0DMV9 641 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 CTCFP49711 727 aaPredicted RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 HADHBP55084 474 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 OSTNP61366 133 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 NOP14P78316 857 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 TMEM132AQ24JP5 1023 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 TMEM192Q8IY95 271 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 STARD7Q9NQZ5 370 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 CTTNBP2NLQ9P2B4 639 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 OGDHLQ9ULD0 1010 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 DDX3YO15523 660 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 ERLIN2O94905 339 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 CST3P01034 146 aaPredicted RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 DARSP14868 501 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 EIF4BP23588 611 aaKnown RBP22.43■■□□□ 1.18
YBX3-202ENST00000279550 PLA2G4AP47712 749 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 CLEC16AQ2KHT3 1053 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 RSPH3Q86UC2 560 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 RHOT2Q8IXI1 618 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 WNT8BQ93098 351 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 PBKQ96KB5 322 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 HINFPQ9BQA5 517 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 AMFRQ9UKV5 643 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 TNFSF13BQ9Y275 285 aa22.43■■□□□ 1.18
YBX3-202ENST00000279550 CEP104O60308 925 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 TSPAN1O60635 241 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 ERLIN1O75477 346 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 RPLP2P05387 115 aaKnown RBP22.42■■□□□ 1.18
YBX3-202ENST00000279550 TUBBP07437 444 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 CRYBB1P53674 252 aaPredicted RBP22.42■■□□□ 1.18
YBX3-202ENST00000279550 RPAINQ86UA6 219 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 EFCAB13Q8IY85 973 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 USP38Q8NB14 1042 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 DMGDHQ9UI17 866 aaKnown RBP22.42■■□□□ 1.18
YBX3-202ENST00000279550 ANK1P16157 1881 aa22.42■■□□□ 1.18
YBX3-202ENST00000279550 A0A0U1RQG5 324 aaPredicted RBP22.41■■□□□ 1.18
YBX3-202ENST00000279550 MEFVO15553 781 aaPredicted RBP22.41■■□□□ 1.18
YBX3-202ENST00000279550 ATP8B1O43520 1251 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 CYP1A2P05177 515 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 ARF4P18085 180 aaPredicted RBP22.41■■□□□ 1.18
YBX3-202ENST00000279550 FGFR4P22455 802 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 AP3M2P53677 418 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 SNX17Q15036 470 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 PCBP1Q15365 356 aaKnown RBP eCLIP22.41■■□□□ 1.18
YBX3-202ENST00000279550 PKN2Q16513 984 aaKnown RBP22.41■■□□□ 1.18
YBX3-202ENST00000279550 ACAD10Q6JQN1 1059 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 UBR7Q8N806 425 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 SLC43A3Q8NBI5 491 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 TMEM40Q8WWA1 233 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 ZNF333Q96JL9 665 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 TRMT13Q9NUP7 481 aaKnown RBP22.41■■□□□ 1.18
YBX3-202ENST00000279550 PCDHB4Q9Y5E5 795 aa22.41■■□□□ 1.18
YBX3-202ENST00000279550 M0QZ92 97 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 ASS1P00966 412 aaKnown RBP22.4■■□□□ 1.18
YBX3-202ENST00000279550 CFHP08603 1231 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 MYBL2P10244 700 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 MYL6P60660 151 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 MRPS6P82932 125 aaKnown RBP22.4■■□□□ 1.18
YBX3-202ENST00000279550 SLC7A5Q01650 507 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 TMEM130Q8N3G9 435 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 ZNF653Q96CK0 615 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 CPB2Q96IY4 423 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 CELF4Q9BZC1 486 aaKnown RBP22.4■■□□□ 1.18
YBX3-202ENST00000279550 L1RE1Q9UN81 338 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 TMEM110-MUSTN1A8MSY1 372 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 MTA2O94776 668 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 GSPT2Q8IYD1 628 aaKnown RBP22.4■■□□□ 1.18
YBX3-202ENST00000279550 RBBP8NLQ8NC74 664 aaPredicted RBP22.4■■□□□ 1.18
YBX3-202ENST00000279550 PDZD7Q9H5P4 517 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 TMEM59LQ9UK28 342 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 CNTN6Q9UQ52 1028 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 NOD1Q9Y239 953 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 PCDHB2Q9Y5E7 798 aa22.4■■□□□ 1.18
YBX3-202ENST00000279550 CLSTN1O94985 981 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 CXCL8P10145 99 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 TFAMQ00059 246 aaKnown RBP22.39■■□□□ 1.17
YBX3-202ENST00000279550 PTK7Q13308 1070 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 SURF1Q15526 300 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 DUOXA2Q1HG44 320 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 DCAF12L1Q5VU92 463 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 C11orf63Q6NUN7 778 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 TMEM270Q6UE05 265 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 CATSPER4Q7RTX7 472 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 CPNE8Q86YQ8 564 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 KRT222Q8N1A0 295 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 ACTRT1Q8TDG2 376 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 GTF3C4Q9UKN8 822 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 CDY2AQ9Y6F7 541 aa22.39■■□□□ 1.17
YBX3-202ENST00000279550 A0A1B0GUA9 196 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 ARVCFO00192 962 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 MAP2K7O14733 419 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 UNGP13051 313 aaPredicted RBP22.38■■□□□ 1.17
YBX3-202ENST00000279550 TBXAS1P24557 533 aaPredicted RBP22.38■■□□□ 1.17
YBX3-202ENST00000279550 CCNI2Q6ZMN8 369 aaPredicted RBP22.38■■□□□ 1.17
YBX3-202ENST00000279550 RASGEF1CQ8N431 466 aa22.38■■□□□ 1.17
YBX3-202ENST00000279550 ARMC5Q96C12 935 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms