RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CD44P16070 742 aaKnown RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 FGFR3P22607 806 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 SP100P23497 879 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 ELF1P32519 619 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 OR1D2P34982 312 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 PIK3CAP42336 1068 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 CLCN4P51793 760 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 VAMP7P51809 220 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 LILRA4P59901 499 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TNNC1P63316 161 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 LRRC63Q05C16 580 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 PAK1Q13153 545 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TPD52L1Q16890 204 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 CCDC40Q4G0X9 1142 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 CES5AQ6NT32 575 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 ANKRD54Q6NXT1 300 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TMC5Q6UXY8 1006 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 CLEC17AQ6ZS10 378 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 ELOA2Q8IYF1 753 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 RNF168Q8IYW5 571 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 ADSSL1Q8N142 457 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 C12orf76Q8N812 135 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 C1orf127Q8N9H9 656 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TRIML1Q8N9V2 468 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 LNX1Q8TBB1 728 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 ATXN2LQ8WWM7 1075 aaKnown RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 DHTKD1Q96HY7 919 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 HPDLQ96IR7 371 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 SENP8Q96LD8 212 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 FBXL18Q96ME1 805 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 ASB2Q96Q27 587 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 MMS19Q96T76 1030 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 SFXN1Q9H9B4 322 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 PIDD1Q9HB75 910 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.285e-38■■■■■ 698.7
CD44-204ENST00000279452 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 KIAA1468Q9P260 1216 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 MTRRQ9UBK8 725 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 DPP7Q9UHL4 492 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 POLIQ9UNA4 740 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 SNX9Q9Y5X1 595 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 IRAK3Q9Y616 596 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TCHHQ07283 1943 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 ANO9A1A5B4 782 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 PRRG1O14668 218 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 ADAM12O43184 909 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 TGM5O43548 720 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 HUS1O60921 280 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 AKAP3O75969 853 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 C8AP07357 584 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 OR4Q2P0C623 313 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 IL9P15248 144 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CCNE1P24864 410 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SSTR3P32745 418 aaPredicted RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 LTBRP36941 435 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 GCLMP48507 274 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CDR1P51861 262 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 AP3M2P53677 418 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 PMS1P54277 932 aaKnown RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 DLG4P78352 724 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 FKBP3Q00688 224 aaKnown RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 ROR1Q01973 937 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SMAD4Q13485 552 aaKnown RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 MORC3Q14149 939 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 MYBPC2Q14324 1141 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 ZNF699Q32M78 642 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 EDRF1Q3B7T1 1238 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 LEXMQ3ZCV2 418 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 TJAP1Q5JTD0 557 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 PPM1LQ5SGD2 360 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 WSCD1Q658N2 575 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 ANKRD40Q6AI12 368 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SASS6Q6UVJ0 657 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CD300LGQ6UXG3 332 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SCARA5Q6ZMJ2 495 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 INTS8Q75QN2 995 aaKnown RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 TRAPPC11Q7Z392 1133 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 THEM5Q8N1Q8 247 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 LRRC52Q8N7C0 313 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 KREMEN2Q8NCW0 462 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CCDC150Q8NCX0 1101 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 SLC7A14Q8TBB6 771 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 GPT2Q8TD30 523 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 MFSD14AQ96MC6 490 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 PGLYRP2Q96PD5 576 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CLSTN3Q9BQT9 956 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 IMPG2Q9BZV3 1241 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CYP4F11Q9HBI6 524 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 RXFP1Q9HBX9 757 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 DMAC2Q9NW81 257 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 CLEC1BQ9P126 229 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 FNIP2Q9P278 1114 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 DACH1Q9UI36 760 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 FBXL5Q9UKA1 691 aa7.03□□□□□ -1.28
CD44-204ENST00000279452 DSEQ9UL01 958 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms