RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 VNN1O95497 513 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 C4BPAP04003 597 aaKnown RBP16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 AP3M2P53677 418 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MYL6P60660 151 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MYL7Q01449 175 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 NCOA4Q13772 614 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 KCNJ12Q14500 433 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CBWD6Q4V339 395 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CBWD3Q5JTY5 395 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CBWD5Q5RIA9 395 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 IRF2BP1Q8IU81 584 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CXorf38Q8TB03 319 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TAS1R2Q8TE23 839 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 RIN2Q8WYP3 895 aaPredicted RBP16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MRPL38Q96DV4 380 aaKnown RBP16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MTMR10Q9NXD2 777 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 SNX9Q9Y5X1 595 aa16.76■□□□□ 0.27
ATP6V1C2-201ENST00000272238 KPNA7A9QM74 516 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 IKBKBO14920 756 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 STX10O60499 249 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 HLA-DRAP01903 254 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PNPLA4P41247 253 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 ELAVL2Q12926 359 aaKnown RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MYO1EQ12965 1108 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 ZNF699Q32M78 642 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 USP41Q3LFD5 358 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 ZACNQ401N2 412 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 KRT39Q6A163 491 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 SCARA5Q6ZMJ2 495 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 RBM23Q86U06 439 aaKnown RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 RNF168Q8IYW5 571 aaPredicted RBP16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 LRRC52Q8N7C0 313 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 LMAN2LQ9H0V9 348 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 REV3LO60673 3130 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PLXNA3P51805 1871 aa16.75■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PRRC2BQ5JSZ5 2229 aaKnown RBP16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 BECN2A8MW95 431 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 LRRN2O75325 713 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CTSAP10619 480 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 ODC1P11926 461 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 SPOPLQ6IQ16 392 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 SUSD3Q96L08 255 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MRPL17Q9NRX2 175 aaKnown RBP16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 NXF1Q9UBU9 619 aaKnown RBP16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MYO7AQ13402 2215 aa16.74■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CYB561D2O14569 222 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 FMO5P49326 533 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 AARSP49588 968 aaKnown RBP eCLIP16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MARSP56192 900 aaKnown RBP16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 KCNH2Q12809 1159 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PSMD5Q16401 504 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 C15orf39Q6ZRI6 1047 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 LUZP1Q86V48 1076 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PPM1EQ8WY54 764 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 IMPG2Q9BZV3 1241 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TSPY26PQ9H489 355 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CBX8Q9HC52 389 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TAB2Q9NYJ8 693 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 POLIQ9UNA4 740 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MTCH2Q9Y6C9 303 aa16.73■□□□□ 0.27
ATP6V1C2-201ENST00000272238 FSCN2O14926 492 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CXCL14O95715 111 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 EFEMP2O95967 443 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 AFPP02771 609 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 FGFR3P22607 806 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TNNC1P63316 161 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 DSG1Q02413 1049 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 ENPEPQ07075 957 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 NCAPHQ15003 741 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CCDC85BQ15834 202 aaPredicted RBP16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 WDR72Q3MJ13 1102 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 TCP11X2Q5H9J9 407 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 VARS2Q5ST30 1063 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 BPIFA3Q9BQP9 254 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 NSUN3Q9H649 340 aaKnown RBP16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 CHST7Q9NS84 486 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 STK39Q9UEW8 545 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 PCDHB8Q9UN66 801 aa16.72■□□□□ 0.27
ATP6V1C2-201ENST00000272238 C2orf71A6NGG8 1288 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms