RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MRPL4Q9BYD3 311 aaKnown RBP9.8□□□□□ -0.84
TPM3-201ENST00000271850 HEBP1Q9NRV9 189 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 MRPS23Q9Y3D9 190 aaKnown RBP9.8□□□□□ -0.84
TPM3-201ENST00000271850 INSL5Q9Y5Q6 135 aa9.8□□□□□ -0.84
TPM3-201ENST00000271850 TSC2P49815 1807 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 SPTBN2O15020 2390 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 MED19A0JLT2 244 aaPredicted RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 FAM170BA6NMN3 283 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 ARNTLO00327 626 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 SYN3O14994 580 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 OR4Q2P0C623 313 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 CXCL8P10145 99 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 HARSP12081 509 aaKnown RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 GJA1P17302 382 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 GUCY2CP25092 1073 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 HOXC13P31276 330 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 PRPHP41219 470 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 TNFSF9P41273 254 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 AARSP49588 968 aaKnown RBP eCLIP9.79□□□□□ -0.84
TPM3-201ENST00000271850 GUCY2FP51841 1108 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 ATP2C1P98194 919 aaPredicted RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 PRKCQQ04759 706 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 DMP1Q13316 513 aaPredicted RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 UBXN2BQ14CS0 331 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 ZBTB6Q15916 424 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 TMEM119Q4V9L6 283 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 TSSK4Q6SA08 328 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 VITQ6UXI7 678 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 TPRG1Q6ZUI0 275 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 KIAA2013Q8IYS2 634 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 BEST2Q8NFU1 509 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 SUSD3Q96L08 255 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 ASB16Q96NS5 453 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 ACAP3Q96P50 834 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 FIZ1Q96SL8 496 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 PLIN2Q99541 437 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 CORO1BQ9BR76 489 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 CCDC94Q9BW85 323 aaPredicted RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 DNAJC25Q9H1X3 360 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 KMT5AQ9NQR1 393 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 PRMT8Q9NR22 394 aaPredicted RBP9.79□□□□□ -0.84
TPM3-201ENST00000271850 GDE1Q9NZC3 331 aa9.79□□□□□ -0.84
TPM3-201ENST00000271850 TICRRQ7Z2Z1 1910 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TTC26A0AVF1 554 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 LILRB5O75023 590 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 PLS3P13797 630 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 RFX1P22670 979 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TGM1P22735 817 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 EPHA5P54756 1037 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 ARPP19P56211 112 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 GRIN1Q05586 938 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 MCL1Q07820 350 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 GAS6Q14393 721 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 NOLC1Q14978 699 aaKnown RBP eCLIP9.78□□□□□ -0.84
TPM3-201ENST00000271850 SLC39A4Q6P5W5 647 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 RTL10Q7L3V2 364 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TMC8Q8IU68 726 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 MAP4K3Q8IVH8 894 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TTC9BQ8N6N2 239 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 SYT2Q8N9I0 419 aaPredicted RBP9.78□□□□□ -0.84
TPM3-201ENST00000271850 ZBTB44Q8NCP5 570 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 SPIRE2Q8WWL2 714 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 KCNN1Q92952 543 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 ELSPBP1Q96BH3 223 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TBC1D32Q96NH3 1257 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 LRRC3BQ96PB8 259 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TMEM209Q96SK2 561 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 MKNK1Q9BUB5 465 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 OSBPL6Q9BZF3 934 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 CYP4F11Q9HBI6 524 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
TPM3-201ENST00000271850 TOPORSQ9NS56 1045 aaPredicted RBP9.78□□□□□ -0.84
TPM3-201ENST00000271850 ANKFY1Q9P2R3 1169 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
TPM3-201ENST00000271850 TIMM13Q9Y5L4 95 aaPredicted RBP9.78□□□□□ -0.84
TPM3-201ENST00000271850 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 M0QZQ0 153 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 SPTLC1O15269 473 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 TRAPPC3O43617 180 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 TOM1L1O75674 476 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 PTPN2P17706 415 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 LRPAP1P30533 357 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 RPL9P32969 192 aaKnown RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 SLC19A1P41440 591 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 VIPR2P41587 438 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 YARSP54577 528 aaKnown RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 NCKAP1LP55160 1127 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 ADCY1Q08828 1119 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 TWF1Q12792 350 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 MTAPQ13126 283 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 ZNF528Q3MIS6 628 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 CTXN3Q4LDR2 81 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 STXBP5Q5T5C0 1151 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 KRT79Q5XKE5 535 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 ERMP1Q7Z2K6 904 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 FAM184AQ8NB25 1140 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms