RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 DDX3YO15523 660 aaKnown RBP16.33■□□□□ 0.2
SF3B4-201ENST00000271628 THAP12O43422 761 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 CA12O43570 354 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 ZMYND10O75800 440 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 CYP2C9P11712 490 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 AKR1A1P14550 325 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 ATICP31939 592 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 PSEN2P49810 448 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
SF3B4-201ENST00000271628 MESDQ14696 234 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 PTPROQ16827 1216 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 KIZQ2M2Z5 673 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 ZNF606Q8WXB4 792 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 TSPYL1Q9H0U9 437 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
SF3B4-201ENST00000271628 KRT19P08727 400 aa16.32■□□□□ 0.2
SF3B4-201ENST00000271628 GNAT1P11488 350 aa16.32■□□□□ 0.2
SF3B4-201ENST00000271628 SLC10A6Q3KNW5 377 aa16.32■□□□□ 0.2
SF3B4-201ENST00000271628 LIN9Q5TKA1 542 aa16.32■□□□□ 0.2
SF3B4-201ENST00000271628 CPA5Q8WXQ8 436 aa16.32■□□□□ 0.2
SF3B4-201ENST00000271628 C2CD2Q9Y426 696 aa16.32■□□□□ 0.2
SF3B4-201ENST00000271628 FAM170AA1A519 330 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 GPR32O75388 356 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 MYBL2P10244 700 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 GRM5P41594 1212 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 ADAM17P78536 824 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 ZNF667Q5HYK9 610 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 NAA35Q5VZE5 725 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 JADE1Q6IE81 842 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 VRTNQ9H8Y1 702 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 ABT1Q9ULW3 272 aaKnown RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 MROH7Q68CQ1 1323 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 KPNA6O60684 536 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 ALDH1A1P00352 501 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 CALCAP01258 141 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 MYL3P08590 195 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 NFICP08651 508 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 P4HA1P13674 534 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 COMTP21964 271 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 AXLP30530 894 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 GGCXP38435 758 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 NOMO3P69849 1222 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 PPP2R5EQ16537 467 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 SCARA3Q6AZY7 606 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 SLC27A1Q6PCB7 646 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 CATSPER4Q7RTX7 472 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 PHF13Q86YI8 300 aaPredicted RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 FAM124BQ9H5Z6 455 aaPredicted RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 PLEKHA5Q9HAU0 1116 aa16.31■□□□□ 0.2
SF3B4-201ENST00000271628 DMGDHQ9UI17 866 aaKnown RBP16.31■□□□□ 0.2
SF3B4-201ENST00000271628 MGAMO43451 1857 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 GOLGA6BA6NDN3 693 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 KRIT1O00522 736 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 DUSP11O75319 330 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 ITGB3P05106 788 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 CD58P19256 250 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 ASPAP45381 313 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 FCGRTP55899 365 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 TMEM132DQ14C87 1099 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 FSCN1Q16658 493 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 WDR72Q3MJ13 1102 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 NOTUMQ6P988 496 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 EMBQ6PCB8 327 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 MON1BQ7L1V2 547 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 IFT20Q8IY31 132 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 NME8Q8N427 588 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 KRT12Q99456 494 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 ADAM22Q9P0K1 906 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 GINS2Q9Y248 185 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 AGPSO00116 658 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 SPOPO43791 374 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 WEE2P0C1S8 567 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 DARSP14868 501 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 EIF4BP23588 611 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 SLC1A1P43005 524 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 EPHB4P54760 987 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 HDAC7Q8WUI4 952 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 LENG1Q96BZ8 264 aaPredicted RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 BCO2Q9BYV7 579 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 NXF1Q9UBU9 619 aaKnown RBP16.3■□□□□ 0.2
SF3B4-201ENST00000271628 ANAPC7Q9UJX3 599 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 DERAQ9Y315 318 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
SF3B4-201ENST00000271628 C17orf102A2RUQ5 167 aa16.29■□□□□ 0.2
SF3B4-201ENST00000271628 MYO1FO00160 1098 aa16.29■□□□□ 0.2
SF3B4-201ENST00000271628 FGGP02679 453 aa16.29■□□□□ 0.2
SF3B4-201ENST00000271628 RRM1P23921 792 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms