RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF148Q9UQR1 794 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 ANKRD31Q8N7Z5 1873 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 ATP9AO75110 1047 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 PECAM1P16284 738 aaPredicted RBP29.11■■■□□ 2.25
CBX4-201ENST00000269397 ALDH1B1P30837 517 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 MTMR1Q13613 665 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 CDAN1Q8IWY9 1227 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 CPXCR1Q8N123 301 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 BBOF1Q8ND07 529 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 CFAP57Q96MR6 1250 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 TBC1D10AQ9BXI6 508 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 KMT5AQ9NQR1 393 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.11■■■□□ 2.25
CBX4-201ENST00000269397 PEX11AO75192 247 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 RAD23BP54727 409 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 MAP4K3Q8IVH8 894 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 ZNF516Q92618 1163 aa29.11■■■□□ 2.25
CBX4-201ENST00000269397 ACSF2Q96CM8 615 aaPredicted RBP29.11■■■□□ 2.25
CBX4-201ENST00000269397 NAF1Q96HR8 494 aaKnown RBP29.11■■■□□ 2.25
CBX4-201ENST00000269397 LOXHD1Q8IVV2 1947 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 GOLGA8SH3BPF8 625 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 GOLGA8MH3BSY2 632 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 EIF2AK2P19525 551 aaKnown RBP29.1■■■□□ 2.25
CBX4-201ENST00000269397 MON1BQ7L1V2 547 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 LRRC8CQ8TDW0 803 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 SLC7A6OSQ96CW6 309 aaPredicted RBP29.1■■■□□ 2.25
CBX4-201ENST00000269397 MFSD14AQ96MC6 490 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 SMC6Q96SB8 1091 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 RNPEPL1Q9HAU8 725 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 WDR91A4D1P6 747 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 ENTPD3O75355 529 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 GPS1Q13098 491 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 DMP1Q13316 513 aaPredicted RBP29.1■■■□□ 2.25
CBX4-201ENST00000269397 ZBED8Q8IZ13 594 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 TTC8Q8TAM2 541 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 PCDHB2Q9Y5E7 798 aa29.1■■■□□ 2.25
CBX4-201ENST00000269397 HNRNPDLO14979 420 aaKnown RBP29.09■■■□□ 2.25
CBX4-201ENST00000269397 NPM3O75607 178 aaKnown RBP29.09■■■□□ 2.25
CBX4-201ENST00000269397 ARSEP51690 589 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 NOP14P78316 857 aaKnown RBP29.09■■■□□ 2.25
CBX4-201ENST00000269397 MTM1Q13496 603 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 FAM81BQ96LP2 452 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 EDF1O60869 148 aaKnown RBP29.09■■■□□ 2.25
CBX4-201ENST00000269397 MYCLP12524 364 aaPredicted RBP29.09■■■□□ 2.25
CBX4-201ENST00000269397 GNAZP19086 355 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 GCNT1Q02742 428 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 MAMLD1Q13495 774 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 CC2D2BQ6DHV5 1058 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 RELL1Q8IUW5 271 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 NUDCD1Q96RS6 583 aa29.09■■■□□ 2.25
CBX4-201ENST00000269397 C12orf65Q9H3J6 166 aaKnown RBP29.09■■■□□ 2.25
CBX4-201ENST00000269397 ENTPD5O75356 428 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 ANKMY2Q8IV38 441 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.08■■■□□ 2.25
CBX4-201ENST00000269397 TMC2Q8TDI7 906 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 TCEAL9Q9UHQ7 104 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 TLR3O15455 904 aaKnown RBP29.08■■■□□ 2.25
CBX4-201ENST00000269397 MAGEB2O15479 319 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 CALB2P22676 271 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 WNT7BP56706 349 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 PARP6Q2NL67 630 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 TAF1BQ53T94 588 aaPredicted RBP29.08■■■□□ 2.25
CBX4-201ENST00000269397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.08■■■□□ 2.251e-13■□□□□ 9.5
CBX4-201ENST00000269397 LBHD1Q9BQE6 289 aaPredicted RBP29.08■■■□□ 2.25
CBX4-201ENST00000269397 NUMBLQ9Y6R0 609 aa29.08■■■□□ 2.25
CBX4-201ENST00000269397 PSTPIP1O43586 416 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 WFS1O76024 890 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 ABHD2P08910 425 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 HSD17B4P51659 736 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 SNRPFP62306 86 aaKnown RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 NFX1Q12986 1120 aaKnown RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 BLMHQ13867 455 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 PDK4Q16654 411 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 AOC3Q16853 763 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 KATNAL2Q8IYT4 538 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 AGGF1Q8N302 714 aaeCLIP29.07■■■□□ 2.24
CBX4-201ENST00000269397 BICD1Q96G01 975 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 MAK16Q9BXY0 300 aaKnown RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 NPHS2Q9NP85 383 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 DNALI1O14645 258 aaPredicted RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 CCNE2O96020 404 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 MYCNP04198 464 aaPredicted RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 RIBC1Q8N443 379 aaPredicted RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 TAB3Q8N5C8 712 aaPredicted RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 C10orf82Q8WW14 230 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 CYP39A1Q9NYL5 469 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 LIASO43766 372 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 CYP1A1P04798 512 aaPredicted RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 POTEJP0CG39 1038 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 TPBGLP0DKB5 382 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 MYBL1P10243 752 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 ALDH3A1P30838 453 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 PSMC4P43686 418 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 CCNG1P51959 295 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 RPL7AP62424 266 aaKnown RBP29.07■■■□□ 2.24
CBX4-201ENST00000269397 HHATQ5VTY9 493 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 ANO5Q75V66 913 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 OTOAQ7RTW8 1153 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 SUPT20HQ8NEM7 779 aa29.07■■■□□ 2.24
CBX4-201ENST00000269397 EFTUD2Q15029 972 aaKnown RBP eCLIP29.06■■■□□ 2.242e-7■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms