RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 MACROD2A1Z1Q3 448 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 CD4P01730 458 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 CYP3A5P20815 502 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 RAB27AP51159 221 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 LRRC52Q8N7C0 313 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 PCDHB18PQ96TA0 734 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 ISCUQ9H1K1 167 aa15.1■□□□□ 0.01
SS18-201ENST00000269137 NXF1Q9UBU9 619 aaKnown RBP15.1■□□□□ 0.01
SS18-201ENST00000269137 MYH10P35580 1976 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 A0A0A6YYK5 440 aaPredicted RBP15.09■□□□□ 0.01
SS18-201ENST00000269137 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 MMEP08473 750 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 GALCP54803 685 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 CTU1Q7Z7A3 348 aaKnown RBP15.09■□□□□ 0.01
SS18-201ENST00000269137 FAM126BQ8IXS8 530 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 TRIM58Q8NG06 486 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 NOX5Q96PH1 765 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 SEPT11Q9NVA2 429 aaKnown RBP15.09■□□□□ 0.01
SS18-201ENST00000269137 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 POLIQ9UNA4 740 aa15.09■□□□□ 0.01
SS18-201ENST00000269137 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.09■□□□□ 0.01
SS18-201ENST00000269137 CTAGE9A4FU28 777 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 ANKRD62A6NC57 917 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 RTN2O75298 545 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 TACC1O75410 805 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 WEE2P0C1S8 567 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 TMEM253P0C7T8 217 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 ITGA4P13612 1032 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 TMEM130Q8N3G9 435 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 TTC39CQ8N584 583 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 C18orf25Q96B23 403 aaPredicted RBP15.08■□□□□ 0.01
SS18-201ENST00000269137 L2HGDHQ9H9P8 463 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 TAS2R14Q9NYV8 317 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 TUBGCP4Q9UGJ1 667 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 GIT1Q9Y2X7 761 aa15.08■□□□□ 0.01
SS18-201ENST00000269137 SCN1AP35498 2009 aa15.08■□□□□ 0
SS18-201ENST00000269137 A0A0U1RQF3 1178 aa15.08■□□□□ 0
SS18-201ENST00000269137 PIRO00625 290 aa15.08■□□□□ 0
SS18-201ENST00000269137 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0
SS18-201ENST00000269137 MGEA5O60502 916 aa15.08■□□□□ 0
SS18-201ENST00000269137 MYCP01106 439 aaPredicted RBP15.08■□□□□ 0
SS18-201ENST00000269137 SKIP12755 728 aa15.08■□□□□ 0
SS18-201ENST00000269137 GNA15P30679 374 aa15.08■□□□□ 0
SS18-201ENST00000269137 GLRA4Q5JXX5 417 aa15.08■□□□□ 0
SS18-201ENST00000269137 C9orf57Q5W0N0 161 aa15.08■□□□□ 0
SS18-201ENST00000269137 FBXO46Q6PJ61 603 aaPredicted RBP15.08■□□□□ 0
SS18-201ENST00000269137 FAM43BQ6ZT52 329 aaPredicted RBP15.08■□□□□ 0
SS18-201ENST00000269137 PPP1R10Q96QC0 940 aaKnown RBP15.08■□□□□ 0
SS18-201ENST00000269137 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
SS18-201ENST00000269137 TMCO5BA8MYB1 307 aa15.07■□□□□ 0
SS18-201ENST00000269137 PTGESO14684 152 aa15.07■□□□□ 0
SS18-201ENST00000269137 MOCS3O95396 460 aa15.07■□□□□ 0
SS18-201ENST00000269137 FTLP02792 175 aaPredicted RBP15.07■□□□□ 0
SS18-201ENST00000269137 SELPP16109 830 aa15.07■□□□□ 0
SS18-201ENST00000269137 CD58P19256 250 aa15.07■□□□□ 0
SS18-201ENST00000269137 BFSP2Q13515 415 aa15.07■□□□□ 0
SS18-201ENST00000269137 MBTPS1Q14703 1052 aa15.07■□□□□ 0
SS18-201ENST00000269137 IFI16Q16666 785 aaKnown RBP15.07■□□□□ 0
SS18-201ENST00000269137 CLEC16AQ2KHT3 1053 aa15.07■□□□□ 0
SS18-201ENST00000269137 SCARA5Q6ZMJ2 495 aa15.07■□□□□ 0
SS18-201ENST00000269137 TRIM72Q6ZMU5 477 aa15.07■□□□□ 0
SS18-201ENST00000269137 CTNNBL1Q8WYA6 563 aaPredicted RBP15.07■□□□□ 0
SS18-201ENST00000269137 ZNF333Q96JL9 665 aa15.07■□□□□ 0
SS18-201ENST00000269137 ALS2CR12Q96Q35 445 aa15.07■□□□□ 0
SS18-201ENST00000269137 NCANO14594 1321 aa15.07■□□□□ 0
SS18-201ENST00000269137 PAEPP09466 180 aa15.06■□□□□ 0
SS18-201ENST00000269137 HSPA8P11142 646 aaKnown RBP15.06■□□□□ 0
SS18-201ENST00000269137 ATF7P17544 494 aaPredicted RBP15.06■□□□□ 0
SS18-201ENST00000269137 LRPAP1P30533 357 aa15.06■□□□□ 0
SS18-201ENST00000269137 PNPLA4P41247 253 aa15.06■□□□□ 0
SS18-201ENST00000269137 TNNC1P63316 161 aa15.06■□□□□ 0
SS18-201ENST00000269137 INCA1Q0VD86 236 aa15.06■□□□□ 0
SS18-201ENST00000269137 TUBB2AQ13885 445 aa15.06■□□□□ 0
SS18-201ENST00000269137 TCEAL1Q15170 157 aa15.06■□□□□ 0
SS18-201ENST00000269137 DNAAF5Q86Y56 855 aa15.06■□□□□ 0
SS18-201ENST00000269137 GSTCDQ8NEC7 633 aa15.06■□□□□ 0
SS18-201ENST00000269137 ARMC5Q96C12 935 aa15.06■□□□□ 0
SS18-201ENST00000269137 ADAM2Q99965 735 aa15.06■□□□□ 0
SS18-201ENST00000269137 TUBB2BQ9BVA1 445 aa15.06■□□□□ 0
SS18-201ENST00000269137 SDCBP2Q9H190 292 aa15.06■□□□□ 0
SS18-201ENST00000269137 SMYD3Q9H7B4 428 aa15.06■□□□□ 0
SS18-201ENST00000269137 SLC38A7Q9NVC3 462 aa15.06■□□□□ 0
SS18-201ENST00000269137 PCDHGC5Q9Y5F6 944 aa15.06■□□□□ 0
SS18-201ENST00000269137 CAPN6Q9Y6Q1 641 aa15.06■□□□□ 0
SS18-201ENST00000269137 UQCRHLA0A096LP55 91 aa15.06■□□□□ 0
SS18-201ENST00000269137 PITPNM1O00562 1244 aa15.06■□□□□ 0
SS18-201ENST00000269137 CILPO75339 1184 aa15.06■□□□□ 0
SS18-201ENST00000269137 CALCAP01258 141 aa15.06■□□□□ 0
SS18-201ENST00000269137 CYP1A1P04798 512 aaPredicted RBP15.06■□□□□ 0
SS18-201ENST00000269137 UQCRHP07919 91 aa15.06■□□□□ 0
SS18-201ENST00000269137 UNGP13051 313 aaPredicted RBP15.06■□□□□ 0
SS18-201ENST00000269137 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
SS18-201ENST00000269137 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
SS18-201ENST00000269137 ACAD10Q6JQN1 1059 aa15.06■□□□□ 0
SS18-201ENST00000269137 AGMOQ6ZNB7 445 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms