RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PPP1R2P3Q6NXS1 205 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 CDR2LQ86X02 465 aaPredicted RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 FAM212AQ96EL1 285 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 ACAP3Q96P50 834 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 TSPAN18Q96SJ8 248 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 OSMRQ99650 979 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 CCDC94Q9BW85 323 aaPredicted RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 CARD6Q9BX69 1037 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 XYLT2Q9H1B5 865 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 TRPV6Q9H1D0 765 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 SNX12Q9UMY4 172 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 LACTBL1A8MY62 500 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
COPS3-201ENST00000268717 CST3P01034 146 aaPredicted RBP16.44■□□□□ 0.22
COPS3-201ENST00000268717 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
COPS3-201ENST00000268717 ZNF132P52740 706 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 YWHAEP62258 255 aaKnown RBP16.44■□□□□ 0.22
COPS3-201ENST00000268717 SLC10A6Q3KNW5 377 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 SPOPLQ6IQ16 392 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 RSPH3Q86UC2 560 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 TMEM192Q8IY95 271 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 RPGRIP1Q96KN7 1286 aa16.44■□□□□ 0.22
COPS3-201ENST00000268717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.22
COPS3-201ENST00000268717 MEFVO15553 781 aaPredicted RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 KRT5P13647 590 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 MYL6P60660 151 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 OSTNP61366 133 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 ZNF200P98182 395 aaPredicted RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 PTPN11Q06124 597 aaPredicted RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 CKAP4Q07065 602 aaKnown RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 ZNF699Q32M78 642 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 FAM47CQ5HY64 1035 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 TRIM72Q6ZMU5 477 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 SYCE1Q8N0S2 351 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 ARID3AQ99856 593 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 TRMT13Q9NUP7 481 aaKnown RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 SEPT11Q9NVA2 429 aaKnown RBP16.43■□□□□ 0.22
COPS3-201ENST00000268717 ITGA11Q9UKX5 1188 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 ANK1P16157 1881 aa16.43■□□□□ 0.22
COPS3-201ENST00000268717 GRID2IPA4D2P6 1211 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 ENC1O14682 589 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 BUB1O43683 1085 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 PALMO75781 387 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 NFICP08651 508 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 FPGSQ05932 587 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 TMEM62Q0P6H9 643 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 TMEM132DQ14C87 1099 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 JADE1Q6IE81 842 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 MFSD5Q6N075 450 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 LRRC57Q8N9N7 239 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 CXorf38Q8TB03 319 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 PCDHB18PQ96TA0 734 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 PPP1R12CQ9BZL4 782 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 CDHR5Q9HBB8 845 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 RNF14Q9UBS8 474 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 SIX4Q9UIU6 781 aa16.42■□□□□ 0.22
COPS3-201ENST00000268717 CES2O00748 559 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 MTA2O94776 668 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 NPTXRO95502 500 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 MMEP08473 750 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 CLEC16AQ2KHT3 1053 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 MEI1Q5TIA1 1274 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 SERINC5Q86VE9 423 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 GOLGA1Q92805 767 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 CELF4Q9BZC1 486 aaKnown RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 HIPK3Q9H422 1215 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 TAS2R14Q9NYV8 317 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 M0QZ92 97 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 FGFR4P22455 802 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 GPC5P78333 572 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 MRPS6P82932 125 aaKnown RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 UMODL1Q5DID0 1318 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 ZNF572Q7Z3I7 529 aaPredicted RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 RBBP8NLQ8NC74 664 aaPredicted RBP16.41■□□□□ 0.22
COPS3-201ENST00000268717 TMEM40Q8WWA1 233 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 ANKRD7Q92527 254 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 UBXN4Q92575 508 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 TRIM11Q96F44 468 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 SNX27Q96L92 541 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 BCO2Q9BYV7 579 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 GTF3C4Q9UKN8 822 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
COPS3-201ENST00000268717 CTAGE15A4D2H0 777 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 CYP1A1P04798 512 aaPredicted RBP16.4■□□□□ 0.22
COPS3-201ENST00000268717 CTAGE8P0CG41 777 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 MYBL1P10243 752 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms