RNA–Protein interactions for RNA: ENST00000266943.10

SLC46A3-201, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC46A3, Length 3,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-201ENST00000266943 NOTUMQ6P988 496 aa15.21■□□□□ 0.03
SLC46A3-201ENST00000266943 ZNF677Q86XU0 584 aa15.21■□□□□ 0.03
SLC46A3-201ENST00000266943 RHOT2Q8IXI1 618 aa15.21■□□□□ 0.03
SLC46A3-201ENST00000266943 HES6Q96HZ4 224 aa15.21■□□□□ 0.03
SLC46A3-201ENST00000266943 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.03
SLC46A3-201ENST00000266943 HADHBP55084 474 aaKnown RBP15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 BPIFB4P59827 614 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 TCEAL1Q15170 157 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 MSANTD4Q8NCY6 345 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 SPATA4Q8NEY3 305 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 SNX27Q96L92 541 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 NUP85Q9BW27 656 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 AKAP5P24588 427 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 NOMO3P69849 1222 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 MRPS25P82663 173 aaKnown RBP15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 GLRA4Q5JXX5 417 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 UBXN11Q5T124 520 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 APOL6Q9BWW8 343 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 BCO2Q9BYV7 579 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 GTF3C4Q9UKN8 822 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 TMEM110-MUSTN1A8MSY1 372 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 PPEF2O14830 753 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 CRYBB1P53674 252 aaPredicted RBP15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 HTRA3P83110 453 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 POU5F1Q01860 360 aaKnown RBP15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 CENPCQ03188 943 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 KYAT1Q16773 422 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 CCDC181Q5TID7 509 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 DCAF12L1Q5VU92 463 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 MON1BQ7L1V2 547 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 MCOLN2Q8IZK6 566 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 SYCE1Q8N0S2 351 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 ZNF606Q8WXB4 792 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 TUBGCP4Q9UGJ1 667 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
SLC46A3-201ENST00000266943 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 ASGR1P07306 291 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 KCNA10Q16322 511 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 TWNKQ96RR1 684 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 DPP3Q9NY33 737 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 CNOT8Q9UFF9 292 aaKnown RBP15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 RECQL4O94761 1208 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 GNAT1P11488 350 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 RRM1P23921 792 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 NKX3-2P78367 333 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 FAM47CQ5HY64 1035 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 CCSAPQ6IQ19 270 aaPredicted RBP15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 FAM228AQ86W67 206 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 OSBPL7Q9BZF2 842 aa15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
SLC46A3-201ENST00000266943 KPNA6O60684 536 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 MTA2O94776 668 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 SEC31AO94979 1220 aaKnown RBP15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 MARCKSL1P49006 195 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 HPDLQ96IR7 371 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 SRRDQ9UH36 339 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 AMFRQ9UKV5 643 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 ALG6Q9Y672 507 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 CTSHP09668 335 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 VSNL1P62760 191 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 MESDQ14696 234 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 C11orf63Q6NUN7 778 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 ALKAL1Q6UXT8 129 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 KLHDC9Q8NEP7 349 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 WHAMMQ8TF30 809 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 TAF4BQ92750 862 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 RPGRIP1Q96KN7 1286 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 C11orf70Q9BRQ4 267 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 KLK14Q9P0G3 267 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 CDY2AQ9Y6F7 541 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 CFAP221Q4G0U5 840 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 ALG3Q92685 438 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 HINFPQ9BQA5 517 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 TRIM6Q9C030 488 aaPredicted RBP15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 SPC25Q9HBM1 224 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
SLC46A3-201ENST00000266943 NSFP46459 744 aaKnown RBP15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 MRPS6P82932 125 aaKnown RBP15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 PCBP1Q15365 356 aaKnown RBP eCLIP15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 TAF2Q6P1X5 1199 aa15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 NME8Q8N427 588 aa15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 KRT35Q92764 455 aa15.17■□□□□ 0.02
SLC46A3-201ENST00000266943 VRTNQ9H8Y1 702 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms