RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 ZBTB45Q96K62 511 aaPredicted RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 MTG1Q9BT17 334 aaPredicted RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 TARS2Q9BW92 718 aaKnown RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 KIF9Q9HAQ2 790 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 Q9Y3F1 56 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 THSD7BQ9C0I4 1608 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 KLHL33A6NCF5 533 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 NR3C1P04150 777 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 HSPA8P11142 646 aaKnown RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 FLT3P36888 993 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 ITIH4Q14624 930 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 KIAA0319LQ8IZA0 1049 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 MDM1Q8TC05 714 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 TLCD1Q96CP7 247 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 ZNF317Q96PQ6 595 aaPredicted RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 CDHR5Q9HBB8 845 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 L3MBTL1Q9Y468 752 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 ARID2Q68CP9 1835 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 IGKV6-21A0A0C4DH24 114 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 C17orf102A2RUQ5 167 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 ASAP2O43150 1006 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 B4GALT5O43286 388 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 SERPING1P05155 500 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 LRRC55Q6ZSA7 311 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 PIGWQ7Z7B1 504 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 TBC1D1Q86TI0 1168 aaPredicted RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 FAM84AQ96KN4 292 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 ACCSQ96QU6 501 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 SH3GL3Q99963 347 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 AGPAT3Q9NRZ7 376 aa13.48□□□□□ -0.25
PRPF6-201ENST00000266079 TYW1Q9NV66 732 aaKnown RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 NOP53Q9NZM5 478 aaKnown RBP13.48□□□□□ -0.25
PRPF6-201ENST00000266079 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 KCNK3O14649 394 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 NAMPTP43490 491 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 ACLYP53396 1101 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 GTF2BQ00403 316 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 FKBP3Q00688 224 aaKnown RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 TCERG1LQ5VWI1 586 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 TMC3Q7Z5M5 1100 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 PBKQ96KB5 322 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 OSMRQ99650 979 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 NUCKS1Q9H1E3 243 aaKnown RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 TRMT13Q9NUP7 481 aaKnown RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 NRCAMQ92823 1304 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 SART1O43290 800 aaKnown RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 IQCF3P0C7M6 154 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 LRRC63Q05C16 580 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 STRN3Q13033 797 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 SFMBT2Q5VUG0 894 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 CAPRIN2Q6IMN6 1127 aaKnown RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 AGAP11Q8TF27 550 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 SYN2Q92777 582 aaPredicted RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 CALR3Q96L12 384 aaKnown RBP13.47□□□□□ -0.25
PRPF6-201ENST00000266079 NLRC4Q9NPP4 1024 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 HOMER3Q9NSC5 361 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
PRPF6-201ENST00000266079 F8VZ95 297 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 HAS3O00219 553 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 CETN3O15182 167 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 EIF3DO15371 548 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRPF6-201ENST00000266079 EXOC3O60645 756 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 AKAP3O75969 853 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 FGFR1OPO95684 399 aaKnown RBP13.46□□□□□ -0.25
PRPF6-201ENST00000266079 CCL5P13501 91 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 ALADP13716 330 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 LIG4P49917 911 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
PRPF6-201ENST00000266079 ADCY2Q08462 1091 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 DCAF17Q5H9S7 520 aaPredicted RBP13.46□□□□□ -0.25
PRPF6-201ENST00000266079 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 SPIRE2Q8WWL2 714 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 WNT8BQ93098 351 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 KATNAL1Q9BW62 490 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
PRPF6-201ENST00000266079 NOD1Q9Y239 953 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 LOXHD1Q8IVV2 1947 aa13.46□□□□□ -0.25
PRPF6-201ENST00000266079 ANKRD33BA6NCL7 494 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 PDXKO00764 312 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 MAGEB2O15479 319 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 CALUO43852 315 aaPredicted RBP13.46□□□□□ -0.26
PRPF6-201ENST00000266079 SMNDC1O75940 238 aaKnown RBP eCLIP13.46□□□□□ -0.26
PRPF6-201ENST00000266079 PRMT2P55345 433 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 OSTNP61366 133 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 KCNMA1Q12791 1236 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 MXD4Q14582 209 aaPredicted RBP13.46□□□□□ -0.26
PRPF6-201ENST00000266079 SLC18A3Q16572 532 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 ZNF570Q96NI8 536 aa13.46□□□□□ -0.26
PRPF6-201ENST00000266079 STRA6Q9BX79 667 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms