RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.75■□□□□ 0.75
SDF4-201ENST00000263741 PHACTR2O75167 634 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 LRRN2O75325 713 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 CLSTN1O94985 981 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 VNN1O95497 513 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 C4BPAP04003 597 aaKnown RBP19.75■□□□□ 0.75
SDF4-201ENST00000263741 SLC35C1Q96A29 364 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 CARNS1A5YM72 827 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 FSCN2O14926 492 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 URODP06132 367 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 CTSAP10619 480 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 RPL17P18621 184 aaKnown RBP19.75■□□□□ 0.75
SDF4-201ENST00000263741 GLUD2P49448 558 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 TAF6P49848 677 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 PTPN14Q15678 1187 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 CCDC85BQ15834 202 aaPredicted RBP19.75■□□□□ 0.75
SDF4-201ENST00000263741 PTPROQ16827 1216 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 ZACNQ401N2 412 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 RBM23Q86U06 439 aaKnown RBP19.75■□□□□ 0.75
SDF4-201ENST00000263741 GLYCTKQ8IVS8 523 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 AOPEPQ8N6M6 819 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 RIN2Q8WYP3 895 aaPredicted RBP19.75■□□□□ 0.75
SDF4-201ENST00000263741 LMAN2LQ9H0V9 348 aa19.75■□□□□ 0.75
SDF4-201ENST00000263741 XIRP2A4UGR9 3374 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 GTF2F1P35269 517 aaKnown RBP eCLIP19.74■□□□□ 0.751e-6■■■■□ 22.3
SDF4-201ENST00000263741 AARSP49588 968 aaKnown RBP eCLIP19.74■□□□□ 0.752e-7■■■■■ 46.4
SDF4-201ENST00000263741 MYL6P60660 151 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 RBP5P82980 135 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 CBWD6Q4V339 395 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 CBWD3Q5JTY5 395 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 CBWD5Q5RIA9 395 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 KIAA1841Q6NSI8 718 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 DSTYKQ6XUX3 929 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 FRMD5Q7Z6J6 570 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 PPM1EQ8WY54 764 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 SUSD3Q96L08 255 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 ZNF560Q96MR9 790 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 PER2O15055 1255 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 LETM1O95202 739 aaPredicted RBP19.74■□□□□ 0.75
SDF4-201ENST00000263741 CXCL14O95715 111 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 PIK3CAP42336 1068 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 USP41Q3LFD5 358 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 C15orf39Q6ZRI6 1047 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 USP37Q86T82 979 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 TAS1R2Q8TE23 839 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 HPDLQ96IR7 371 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 SENP8Q96LD8 212 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 PI4K2AQ9BTU6 479 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 RBSNQ9H1K0 784 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 CHST7Q9NS84 486 aa19.74■□□□□ 0.75
SDF4-201ENST00000263741 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.74■□□□□ 0.75
SDF4-201ENST00000263741 C2orf71A6NGG8 1288 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 IKBKBO14920 756 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 FGFR3P22607 806 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 MXI1P50539 228 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 TRPC3Q13507 836 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 NCOA4Q13772 614 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 SMC1AQ14683 1233 aaKnown RBP19.73■□□□□ 0.75
SDF4-201ENST00000263741 SV2CQ496J9 727 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 TCEAL5Q5H9L2 206 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 TRIM59Q8IWR1 403 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 ENOX1Q8TC92 643 aaKnown RBP19.73■□□□□ 0.75
SDF4-201ENST00000263741 TTPALQ9BTX7 342 aa19.73■□□□□ 0.75
SDF4-201ENST00000263741 METTL14Q9HCE5 456 aaKnown RBP19.73■□□□□ 0.75
SDF4-201ENST00000263741 R3HCC1Q9Y3T6 440 aaKnown RBP19.73■□□□□ 0.75
SDF4-201ENST00000263741 KPNA7A9QM74 516 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 TRAPPC3O43617 180 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 FGFR1OPO95684 399 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 HLA-DRAP01903 254 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 RBM10P98175 930 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 MYL5Q02045 173 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 DSG1Q02413 1049 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 KIAA0319Q5VV43 1072 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 SPOPLQ6IQ16 392 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 LRRC52Q8N7C0 313 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 THAP9Q9H5L6 903 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 TMEM8AQ9HCN3 771 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 MRPL17Q9NRX2 175 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 SNX9Q9Y5X1 595 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 ELAVL2Q12926 359 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 MRPL43Q8N983 215 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 XYLT2Q9H1B5 865 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 NSUN3Q9H649 340 aaKnown RBP19.72■□□□□ 0.75
SDF4-201ENST00000263741 FANCLQ9NW38 375 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 POLIQ9UNA4 740 aa19.72■□□□□ 0.75
SDF4-201ENST00000263741 MTCL1Q9Y4B5 1905 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 M0QZQ0 153 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 CYB561D2O14569 222 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 GNA14O95837 355 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 NRIP1P48552 1158 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 CDR1P51861 262 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 AP3M2P53677 418 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 MARSP56192 900 aaKnown RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 NCAPHQ15003 741 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 PSMD5Q16401 504 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
SDF4-201ENST00000263741 SEMA4DQ92854 862 aa19.71■□□□□ 0.75
SDF4-201ENST00000263741 PDLIM2Q96JY6 352 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms