RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TRIM49P0CI25 452 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 TRIM49CP0CI26 452 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 TMEM260Q9NX78 707 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 KCNA3P22001 575 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 GRIK1P39086 918 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 LONP2Q86WA8 852 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 CYP26A1O43174 497 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 PRG3Q9Y2Y8 225 aaPredicted RBP18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 IQGAP1P46940 1657 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 ATP9BO43861 1147 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 TCF3P15923 654 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 METTL16Q86W50 562 aaKnown RBP18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 CALML6Q8TD86 181 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 TUBGCP3Q96CW5 907 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 THTPAQ9BU02 230 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 hCG_2014768A0A024R1R8 64 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 C3orf62Q6ZUJ4 267 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 TOMM70O94826 608 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 SEC24DO94855 1032 aaPredicted RBP18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 DCAF4L1Q3SXM0 396 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 NUP93Q8N1F7 819 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 PLEKHA5Q9HAU0 1116 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 A0A1W2PQJ5 194 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 ADRA2BP18089 450 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 CLMNQ96JQ2 1002 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 CD209Q9NNX6 404 aa18.3■□□□□ 0.52
NOTCH3-201ENST00000263388 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 POLBP06746 335 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 HSPBP1Q9NZL4 362 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 CCDC142Q17RM4 750 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 PDS5AQ29RF7 1337 aaKnown RBP18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 MMP10P09238 476 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 MCEEQ96PE7 176 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 ARHGEF38Q9NXL2 777 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 DPYSL4O14531 572 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 ADGRB3O60242 1522 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 H2AFYO75367 372 aaKnown RBP18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 NDUFS3O75489 264 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 NAB2Q15742 525 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 TMEM132DQ14C87 1099 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 ENO3P13929 434 aaPredicted RBP18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 SLC30A9Q6PML9 568 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 PKN3Q6P5Z2 889 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 CHP1Q99653 195 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 SPON2Q9BUD6 331 aa18.29■□□□□ 0.52
NOTCH3-201ENST00000263388 IL18RAPO95256 599 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 RALBP11234 206 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SULT1E1P49888 294 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 ST13P50502 369 aaKnown RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 APPL2Q8NEU8 664 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 OLFML3Q9NRN5 406 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 GSG1L2A8MUP6 293 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 GPSM2P81274 684 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 NCOA4Q13772 614 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 PRPF39Q86UA1 669 aaKnown RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 C19orf60Q96EN9 201 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 PSD3Q9NYI0 1048 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 FBXO2Q9UK22 296 aaPredicted RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 DPYDQ12882 1025 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 APLFQ8IW19 511 aaPredicted RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 ZC3H4Q9UPT8 1303 aaKnown RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 HSPA13P48723 471 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 CACNB3P54284 484 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 TRIM71Q2Q1W2 868 aaKnown RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SPDYE7PQ495Y7 208 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 C6orf10Q5SRN2 563 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SLC44A5Q8NCS7 719 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 PAK5Q9P286 719 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 DGAT1O75907 488 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 UCHL3P15374 230 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 PTK7Q13308 1070 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 BTN2A2Q8WVV5 523 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 CNBD2Q96M20 576 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 TDP2O95551 362 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 SGSM1Q2NKQ1 1148 aa18.28■□□□□ 0.52
NOTCH3-201ENST00000263388 ADCY3O60266 1144 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 SESN2P58004 480 aaPredicted RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 MTF1Q14872 753 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 KPNB1Q14974 876 aaKnown RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 LONRF1Q17RB8 773 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 EDRF1Q3B7T1 1238 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 KCTD17Q8N5Z5 321 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 CLCA2Q9UQC9 943 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 MTSS1O43312 755 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 APOA4P06727 396 aa18.27■□□□□ 0.52
NOTCH3-201ENST00000263388 PLA2G4AP47712 749 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms