RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ZNF268Q14587 947 aaPredicted RBP8.71□□□□□ -1.01
PTPN3-201ENST00000262539 MTF1Q14872 753 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 TARBP2Q15633 366 aaKnown RBP8.71□□□□□ -1.01
PTPN3-201ENST00000262539 ACAD10Q6JQN1 1059 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 CBWD2Q8IUF1 395 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 ANKRD13CQ8N6S4 541 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 HINFPQ9BQA5 517 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 TJP3O95049 919 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 CYP2C9P11712 490 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 KRT10P13645 584 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 C3orf20Q8ND61 904 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 GPR20Q99678 358 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 LBHD1Q9BQE6 289 aaPredicted RBP8.71□□□□□ -1.01
PTPN3-201ENST00000262539 ANGPTL3Q9Y5C1 460 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 SFI1A8K8P3 1242 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 HOXA2O43364 376 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 PARNO95453 639 aaKnown RBP8.71□□□□□ -1.01
PTPN3-201ENST00000262539 COL6A1P12109 1028 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 GLRA2P23416 452 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 SGO2Q562F6 1265 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 PCGF5Q86SE9 256 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 VSIG1Q86XK7 387 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 DAW1Q8N136 415 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 PDHXO00330 501 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 PROSCO94903 275 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 GSTA1P08263 222 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 GSTA2P09210 222 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 ABCB4P21439 1286 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 PCSK1P29120 753 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 GNA15P30679 374 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 ELAVL2Q12926 359 aaKnown RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 NAA25Q14CX7 972 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 DNAJC21Q5F1R6 531 aaKnown RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 CCNI2Q6ZMN8 369 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 PHF13Q86YI8 300 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 TPCN2Q8NHX9 752 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 TLR10Q9BXR5 811 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 CPSF3Q9UKF6 684 aaKnown RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 MTSS1O43312 755 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF862O60290 1169 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 ATP9AO75110 1047 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 KCNMA1Q12791 1236 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 NOGQ13253 232 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 TRMT10CQ7L0Y3 403 aaKnown RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 IRF2BP2Q7Z5L9 587 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 RCOR2Q8IZ40 523 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 OR6J1Q8NGC5 347 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 MAGOHBQ96A72 148 aaKnown RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 HHIPL1Q96JK4 782 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 SAMD15Q9P1V8 674 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 ASIC3Q9UHC3 531 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 SLC12A6Q9UHW9 1150 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 L1RE1Q9UN81 338 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 SMIM35A0A1B0GVV1 85 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 DNAJB2P25686 324 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 NXNQ6DKJ4 435 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 B4GALNT4Q76KP1 1039 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 BBS5Q8N3I7 341 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 STMN2Q93045 179 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 DACT3Q96B18 629 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-201ENST00000262539 CHST12Q9NRB3 414 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 RBPJLQ9UBG7 517 aa8.71□□□□□ -1.02
PTPN3-201ENST00000262539 HUS1O60921 280 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 LGALS2P05162 132 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CYP11B1P15538 503 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 ITIH2P19823 946 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 GRM5P41594 1212 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CASP4P49662 377 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CASP8Q14790 479 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CDCA2Q69YH5 1023 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-201ENST00000262539 RGMBQ6NW40 437 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 GDAP1Q8TB36 358 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 NUF2Q9BZD4 464 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 VRTNQ9H8Y1 702 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 COL20A1Q9P218 1284 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 TRAPPC3O43617 180 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 PHBP35232 272 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 PLA2G4FQ68DD2 849 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 EEPD1Q7L9B9 569 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CPLX4Q7Z7G2 160 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CAVIN3Q969G5 261 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 FOXN3O00409 490 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-201ENST00000262539 MOCS3O95396 460 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 GNL1P36915 607 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-201ENST00000262539 JAG1P78504 1218 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 TMEM132DQ14C87 1099 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 SH2D4BQ5SQS7 431 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CCDC121Q6ZUS5 278 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF571Q7Z3V5 609 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-201ENST00000262539 YAF2Q8IY57 180 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 EXD1Q8NHP7 514 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 ALG6Q9Y672 507 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 CCDC88AQ3V6T2 1871 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 MROH7Q68CQ1 1323 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 I3L4J1 428 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 FBXO21O94952 628 aa8.7□□□□□ -1.02
PTPN3-201ENST00000262539 TBC1D8O95759 1140 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms