RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 MYL2P10916 166 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 PLCB4Q15147 1175 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 GALNT4Q8N4A0 578 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 MCUQ8NE86 351 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 EPS8L1Q8TE68 723 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 SEMA4DQ92854 862 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 PRMT6Q96LA8 375 aaPredicted RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 RAB6BQ9NRW1 208 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 H0YGN5 161 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 M0R2N6 131 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 MCF2LO15068 1137 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 ATP9AO75110 1047 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 HLA-DRAP01903 254 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 ECHS1P30084 290 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 GTF2H1P32780 548 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 RPL7AP62424 266 aaKnown RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 FOXD4Q12950 439 aaPredicted RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 OLFML2BQ68BL8 750 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 ZDHHC24Q6UX98 284 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 MFSD7Q6UXD7 560 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 CEP128Q6ZU80 1094 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 TCP10LQ8TDR4 215 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 PPP1R13LQ8WUF5 828 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 NMD3Q96D46 503 aaKnown RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 AGAP3Q96P47 875 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 MECRQ9BV79 373 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 RBAKQ9NYW8 714 aaPredicted RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 NFS1Q9Y697 457 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 BCL9O00512 1426 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 F7P08709 466 aaPredicted RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 MMP13P45452 471 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 PSMC1P62191 440 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 MPP2Q14168 576 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 CYTH1Q15438 398 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 RASSF3Q86WH2 238 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 ARHGAP24Q8N264 748 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 PPP4R1Q8TF05 950 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 RXFP1Q9HBX9 757 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 MRPL47Q9HD33 250 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 SLC16A3O15427 465 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 AVILO75366 819 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 VCAM1P19320 739 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 HOXD13P35453 343 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 PTDSS1P48651 473 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 YARSP54577 528 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 ARL4CP56559 192 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 ITIH4Q14624 930 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 RFWD3Q6PCD5 774 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 YTHDF3Q7Z739 585 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 PCGF5Q86SE9 256 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 NUDCD3Q8IVD9 361 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 GLIS1Q8NBF1 620 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 RBBP8NLQ8NC74 664 aaPredicted RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 FBXO36Q8NEA4 188 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 IL31RAQ8NI17 732 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 UBA3Q8TBC4 463 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 FAM81BQ96LP2 452 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 TAAR1Q96RJ0 339 aa10.65□□□□□ -0.7
PALB2-201ENST00000261584 PAPOLBQ9NRJ5 636 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 XPO7Q9UIA9 1087 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 FNDC3AQ9Y2H6 1198 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.65□□□□□ -0.7
PALB2-201ENST00000261584 ASAP2O43150 1006 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 LCA5LO95447 670 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 PYGBP11216 843 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 FOXN2P32314 431 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 TAS2R40P59535 323 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.71
PALB2-201ENST00000261584 XRCC4Q13426 336 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 ALCAMQ13740 583 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.71
PALB2-201ENST00000261584 ZNF662Q6ZS27 426 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 UCMAQ8WVF2 138 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 CNKSR2Q8WXI2 1034 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 PGM2Q96G03 612 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 SCYL1Q96KG9 808 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 HEXIM2Q96MH2 286 aaKnown RBP10.65□□□□□ -0.71
PALB2-201ENST00000261584 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.71
PALB2-201ENST00000261584 GOLGA4Q13439 2230 aaKnown RBP10.64□□□□□ -0.71
PALB2-201ENST00000261584 FAM237BA0A1B0GVD1 139 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 DPPA5A6NC42 116 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 SPDYE5A6NIY4 337 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 ECE2O60344 883 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
PALB2-201ENST00000261584 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
PALB2-201ENST00000261584 CDH6P55285 790 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 PTK7Q13308 1070 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 STAT4Q14765 748 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 MIS18BP1Q6P0N0 1132 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 OTOP1Q7RTM1 612 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 TTC7BQ86TV6 843 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
PALB2-201ENST00000261584 COA1Q9GZY4 146 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 POLR3FQ9H1D9 316 aaPredicted RBP10.64□□□□□ -0.71
PALB2-201ENST00000261584 GRHL1Q9NZI5 618 aa10.64□□□□□ -0.71
PALB2-201ENST00000261584 WRAP73Q9P2S5 460 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms