RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CCDC39Q9UFE4 941 aa20.65■□□□□ 0.9
TM6SF1-201ENST00000258909 AFF4Q9UHB7 1163 aaKnown RBP20.65■□□□□ 0.9
TM6SF1-201ENST00000258909 SIT1Q9Y3P8 196 aa20.65■□□□□ 0.9
TM6SF1-201ENST00000258909 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
TM6SF1-201ENST00000258909 PROB1E7EW31 1015 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 XPOTO43592 962 aaKnown RBP20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 ADRB2P07550 413 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 AARSP49588 968 aaKnown RBP eCLIP20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 SPATA1Q5VX52 437 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 RRAGBQ5VZM2 374 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 ADALQ6DHV7 355 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 USP37Q86T82 979 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 PANK2Q9BZ23 570 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 AVENQ9NQS1 362 aaPredicted RBP20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 TBC1D7Q9P0N9 293 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 CEP72Q9P209 647 aa20.64■□□□□ 0.89
TM6SF1-201ENST00000258909 MYMKA6NI61 221 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 SPTLC1O15269 473 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 OAZ2O95190 189 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 VNN2O95498 520 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 GJA1P17302 382 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 SLC44A4Q53GD3 710 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 TANGO2Q6ICL3 276 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 PDZD4Q76G19 769 aaPredicted RBP20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 ZNF720Q7Z2F6 126 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 BEST2Q8NFU1 509 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 ZNF512Q96ME7 567 aaPredicted RBP20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 USP28Q96RU2 1077 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 GDE1Q9NZC3 331 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 MTMR6Q9Y217 621 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 SCN1AP35498 2009 aa20.63■□□□□ 0.89
TM6SF1-201ENST00000258909 TULP1O00294 542 aaPredicted RBP20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 MYL4P12829 197 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 GLULP15104 373 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 CD72P21854 359 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 CDR1P51861 262 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 STARD6P59095 220 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 LILRA4P59901 499 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 KCNA1Q09470 495 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 TMEM132DQ14C87 1099 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 IQCEQ6IPM2 695 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 ELMOD1Q8N336 334 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 CRISPLD1Q9H336 500 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 ST6GALNAC4Q9H4F1 302 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 DLGAP2Q9P1A6 1054 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 STK17AQ9UEE5 414 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 AGO2Q9UKV8 859 aaKnown RBP20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 MIA3Q5JRA6 1907 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 FAM186AA6NE01 2351 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 CACNA1IQ9P0X4 2223 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 PRR23AA6NEV1 266 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 MLF2Q15773 248 aaPredicted RBP20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 FAM78AQ5JUQ0 283 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 CYP4A22Q5TCH4 519 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 C9orf57Q5W0N0 161 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 OVOS1Q6IE37 1185 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 SV2BQ7L1I2 683 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 CD302Q8IX05 232 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 PJA1Q8NG27 643 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 SHDQ96IW2 340 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 SENP8Q96LD8 212 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 ZSWIM3Q96MP5 696 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 TMEM209Q96SK2 561 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 MRPL44Q9H9J2 332 aaKnown RBP20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 SLC27A5Q9Y2P5 690 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 MTF2Q9Y483 593 aaPredicted RBP20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 YIPF1Q9Y548 306 aa20.62■□□□□ 0.89
TM6SF1-201ENST00000258909 ZNF197O14709 1029 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 MOSPD3O75425 235 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 ECI2O75521 394 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 FCARP24071 287 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 ABCD1P33897 745 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 TXLNAP40222 546 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 DUSP4Q13115 394 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 SLFN12LQ6IEE8 588 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 DNAJC19Q96DA6 116 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 INTS4Q96HW7 963 aaKnown RBP20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 TSPAN18Q96SJ8 248 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 STYXL1Q9Y6J8 313 aa20.61■□□□□ 0.89
TM6SF1-201ENST00000258909 A0A087X0B3 334 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 PIRO00625 290 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 PPP1R37O75864 691 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 ADSSP30520 456 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 PFKPQ01813 784 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 GRM2Q14416 872 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 UBXN2BQ14CS0 331 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 CRELD2Q6UXH1 353 aaPredicted RBP20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 POMGNT1Q8WZA1 660 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 NKD2Q969F2 451 aaPredicted RBP20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 ASAH2Q9NR71 780 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 MAFFQ9ULX9 164 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 SPTBN4Q9H254 2564 aa20.6■□□□□ 0.89
TM6SF1-201ENST00000258909 KANSL1LA0AUZ9 987 aa20.59■□□□□ 0.89
TM6SF1-201ENST00000258909 OR6C75A6NL08 312 aa20.59■□□□□ 0.89
TM6SF1-201ENST00000258909 K7ELQ4 463 aaPredicted RBP20.59■□□□□ 0.89
TM6SF1-201ENST00000258909 ODC1P11926 461 aa20.59■□□□□ 0.89
TM6SF1-201ENST00000258909 IDEP14735 1019 aa20.59■□□□□ 0.89
TM6SF1-201ENST00000258909 TYMPP19971 482 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms