RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ADAMTS10Q9H324 1103 aa29.57■■■□□ 2.32
CCM2-201ENST00000258781 CITO14578 2027 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 A0A1B0GUA9 196 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 KPNA6O60684 536 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 CALCAP01258 141 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 ASGR1P07306 291 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 MYBL1P10243 752 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 ZNF200P98182 395 aaPredicted RBP29.56■■■□□ 2.32
CCM2-201ENST00000258781 LONRF2Q1L5Z9 754 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 ZNF699Q32M78 642 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 SCARA3Q6AZY7 606 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 PPP1R2P3Q6NXS1 205 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 RASGEF1CQ8N431 466 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 FAXDC2Q96IV6 333 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 XYLT2Q9H1B5 865 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 FAM53CQ9NYF3 392 aa29.56■■■□□ 2.32
CCM2-201ENST00000258781 LACTBL1A8MY62 500 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 DDX3YO15523 660 aaKnown RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 CEP104O60308 925 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 CST5P28325 142 aaPredicted RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 CENPCQ03188 943 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 KCNA10Q16322 511 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 PTPROQ16827 1216 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 RPS6KC1Q96S38 1066 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 ADPGKQ9BRR6 497 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 NUP85Q9BW27 656 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 GCOM2Q9BZD3 368 aaPredicted RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 AVENQ9NQS1 362 aaPredicted RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 RALGAPA2Q2PPJ7 1873 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 FAM170AA1A519 330 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 MIF4GDA9UHW6 222 aaKnown RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 HOXC8P31273 242 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 PCBP1Q15365 356 aaKnown RBP eCLIP29.55■■■□□ 2.32
CCM2-201ENST00000258781 BEND6Q5SZJ8 279 aaPredicted RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 ZNF564Q8TBZ8 553 aaPredicted RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 HMX1Q9NP08 348 aaPredicted RBP29.55■■■□□ 2.32
CCM2-201ENST00000258781 TMEM59LQ9UK28 342 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 ALG6Q9Y672 507 aa29.55■■■□□ 2.32
CCM2-201ENST00000258781 PGRMC1O00264 195 aaKnown RBP29.54■■■□□ 2.32
CCM2-201ENST00000258781 TREHO43280 583 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 YWHAEP62258 255 aaKnown RBP29.54■■■□□ 2.32
CCM2-201ENST00000258781 DCAF4L1Q3SXM0 396 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 LHX8Q68G74 356 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 RUFY4Q6ZNE9 571 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 APBB1IPQ7Z5R6 666 aaPredicted RBP29.54■■■□□ 2.32
CCM2-201ENST00000258781 MCOLN2Q8IZK6 566 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.54■■■□□ 2.32
CCM2-201ENST00000258781 LRRC1Q9BTT6 524 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 TTC7AQ9ULT0 858 aaPredicted RBP29.54■■■□□ 2.32
CCM2-201ENST00000258781 PTPN22Q9Y2R2 807 aa29.54■■■□□ 2.32
CCM2-201ENST00000258781 MEFVO15553 781 aaPredicted RBP29.53■■■□□ 2.32
CCM2-201ENST00000258781 ATMINO43313 823 aaPredicted RBP29.53■■■□□ 2.32
CCM2-201ENST00000258781 NFICP08651 508 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 KIZQ2M2Z5 673 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 C7orf31Q8N865 590 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 FAM49AQ9H0Q0 323 aaPredicted RBP29.53■■■□□ 2.32
CCM2-201ENST00000258781 CNOT8Q9UFF9 292 aaKnown RBP29.53■■■□□ 2.32
CCM2-201ENST00000258781 GPR32O75388 356 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 CYP2C9P11712 490 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 NSFP46459 744 aaKnown RBP29.53■■■□□ 2.32
CCM2-201ENST00000258781 JADE1Q6IE81 842 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 C8orf74Q6P047 294 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 CARD9Q9H257 536 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 SIX4Q9UIU6 781 aa29.53■■■□□ 2.32
CCM2-201ENST00000258781 ASPAP45381 313 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 TNNC1P63316 161 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 NBPF20Q3BBV1 942 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 SLC10A6Q3KNW5 377 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 MAP9Q49MG5 647 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 CISHQ9NSE2 258 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 MROH7Q68CQ1 1323 aa29.52■■■□□ 2.32
CCM2-201ENST00000258781 C17orf102A2RUQ5 167 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 THAP12O43422 761 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 GRM5P41594 1212 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 NOMO3P69849 1222 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 NAA35Q5VZE5 725 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 NT5DC4Q86YG4 428 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 C1orf127Q8N9H9 656 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 ACAP3Q96P50 834 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 FUT8Q9BYC5 575 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 NOC2LQ9Y3T9 749 aaKnown RBP29.51■■■□□ 2.31
CCM2-201ENST00000258781 TMEM62Q0P6H9 643 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 CD302Q8IX05 232 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 CYFIP2Q96F07 1278 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 VCPIP1Q96JH7 1222 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 C2CD2Q9Y426 696 aa29.51■■■□□ 2.31
CCM2-201ENST00000258781 MESDQ14696 234 aa29.5■■■□□ 2.31
CCM2-201ENST00000258781 CLUL1Q15846 466 aa29.5■■■□□ 2.31
CCM2-201ENST00000258781 MON1BQ7L1V2 547 aa29.5■■■□□ 2.31
CCM2-201ENST00000258781 RNF180Q86T96 592 aa29.5■■■□□ 2.31
CCM2-201ENST00000258781 CPA5Q8WXQ8 436 aa29.5■■■□□ 2.31
CCM2-201ENST00000258781 ATICP31939 592 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 ZNF667Q5HYK9 610 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 PHF13Q86YI8 300 aaPredicted RBP29.49■■■□□ 2.31
CCM2-201ENST00000258781 UBL4BQ8N7F7 174 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 ZNF606Q8WXB4 792 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 BCO2Q9BYV7 579 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 WNT8AQ9H1J5 351 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 VRTNQ9H8Y1 702 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 STIM2Q9P246 746 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms