RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 A1BGP04217 495 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 OCM2P0CE71 109 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 OCMP0CE72 109 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 EPB42P16452 691 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 HADHBP55084 474 aaKnown RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 FOXK1P85037 733 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 CDC16Q13042 620 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 PDE1CQ14123 709 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 LPIN1Q14693 890 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 PPP1R26Q5T8A7 1209 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 KDELC1Q6UW63 502 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 RANBP10Q6VN20 620 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 C11orf57Q6ZUT1 292 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 TTC6Q86TZ1 520 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 NKAIN4Q8IVV8 208 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 CCDC28AQ8IWP9 274 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 TCP11L2Q8N4U5 519 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 ARFGAP2Q8N6H7 521 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 OR52K2Q8NGK3 314 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 RIN3Q8TB24 985 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 KLHL29Q96CT2 875 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 YME1L1Q96TA2 773 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 DDX50Q9BQ39 737 aaKnown RBP8.16□□□□□ -1.1
GPNMB-201ENST00000258733 NUDT12Q9BQG2 462 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 TRIM15Q9C019 465 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 EPB41L1Q9H4G0 881 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 NMRK1Q9NWW6 199 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 CLEC4AQ9UMR7 237 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 MAPRE3Q9UPY8 281 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 SNCAIPQ9Y6H5 919 aa8.16□□□□□ -1.1
GPNMB-201ENST00000258733 CPS1P31327 1500 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 GOLGA8QA0A0J9YX86 632 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 ARHGEF37A1IGU5 675 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 GOLGA8OA6NCC3 632 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 SYNDIG1LA6NDD5 238 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 MIF4GDA9UHW6 222 aaKnown RBP8.15□□□□□ -1.1
GPNMB-201ENST00000258733 GOLGA8NF8WBI6 632 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 MTSS1O43312 755 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 AQP9O43315 295 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 GABBR2O75899 941 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 UBTFL6P0CB48 400 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-201ENST00000258733 ACTN1P12814 892 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 ITGAXP20702 1163 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 PCP4P48539 62 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 POU3F4P49335 361 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 GNG2P59768 71 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 CCNA1P78396 465 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 FANCCQ00597 558 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 FAM205BPQ63HN1 556 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 CCNI2Q6ZMN8 369 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-201ENST00000258733 LPCAT2Q7L5N7 544 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 IFT20Q8IY31 132 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 ENAHQ8N8S7 591 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-201ENST00000258733 SUPT20HQ8NEM7 779 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 TEX47Q8TBZ9 253 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 FERMT2Q96AC1 680 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 ATP6V1G3Q96LB4 118 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 PSD2Q9BQI7 771 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 DESI2Q9BSY9 194 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 CSRNP2Q9H175 543 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 ARMC7Q9H6L4 198 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 PHAXQ9H814 394 aaKnown RBP8.15□□□□□ -1.1
GPNMB-201ENST00000258733 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 CYP39A1Q9NYL5 469 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 STMN3Q9NZ72 180 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 KIF17Q9P2E2 1029 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 FAM8A1Q9UBU6 413 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 CLEC11AQ9Y240 323 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.15□□□□□ -1.1
GPNMB-201ENST00000258733 USP32Q8NFA0 1604 aa8.15□□□□□ -1.1
GPNMB-201ENST00000258733 SIGLEC16A6NMB1 481 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 GOLGA8SH3BPF8 625 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 RGS13O14921 159 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 PI15O43692 258 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 SSX5O60225 188 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 DKC1O60832 514 aaKnown RBP eCLIP8.15□□□□□ -1.11
GPNMB-201ENST00000258733 GFAPP14136 432 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 ALOX12P18054 663 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 SLCO1A2P46721 670 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 NEK4P51957 841 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 ARFIP1P53367 373 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 STK4Q13043 487 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 RTP2Q5QGT7 225 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 TMEM63BQ5T3F8 832 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 PXDC1Q5TGL8 231 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 RESP18Q5W5W9 173 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 CYP2U1Q7Z449 544 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 SPATA5Q8NB90 893 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 OPALINQ96PE5 141 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 GAS2L1Q99501 681 aaPredicted RBP8.15□□□□□ -1.11
GPNMB-201ENST00000258733 KCNN2Q9H2S1 579 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 SH2D4AQ9H788 454 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 ARHGEF3Q9NR81 526 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 SMYD2Q9NRG4 433 aa8.15□□□□□ -1.11
GPNMB-201ENST00000258733 CUEDC1Q9NWM3 386 aaPredicted RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms