RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GTF2H1P32780 548 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 TRABDQ9H4I3 376 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 SPATA31D1Q6ZQQ2 1576 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 C17orf102A2RUQ5 167 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 DNAJC6O75061 913 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 VSNL1P62760 191 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 RNF180Q86T96 592 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 ARHGAP18Q8N392 663 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 MRPL46Q9H2W6 279 aaKnown RBP19.91■□□□□ 0.78
PTPRE-201ENST00000254667 RAB6BQ9NRW1 208 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 KLHL11Q9NVR0 708 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 DCTN4Q9UJW0 460 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 GNL1P36915 607 aaPredicted RBP19.91■□□□□ 0.78
PTPRE-201ENST00000254667 Q4G0T1 1027 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 FAM129AQ9BZQ8 928 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 STOML1Q9UBI4 398 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 APRTP07741 180 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 NAMPTP43490 491 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 TMEM62Q0P6H9 643 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 RAD9BQ6WBX8 426 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 FEZF2Q8TBJ5 459 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 KIFC3Q9BVG8 833 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 ZC3H7BQ9UGR2 993 aaKnown RBP19.91■□□□□ 0.78
PTPRE-201ENST00000254667 CHUKO15111 745 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 COMTP21964 271 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 GYS2P54840 703 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 ST8SIA6P61647 398 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 ACER1Q8TDN7 264 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 MLXIPLQ9NP71 852 aa19.91■□□□□ 0.78
PTPRE-201ENST00000254667 OGTO15294 1046 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 NPTXRO95502 500 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 LBRQ14739 615 aaKnown RBP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 SH3KBP1Q96B97 665 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 CENPKQ9BS16 269 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 GTF3C4Q9UKN8 822 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 C1orf146Q5VVC0 180 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 LRRC43Q8N309 656 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 MTBPQ96DY7 904 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 FRMD8Q9BZ67 464 aaPredicted RBP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 STK25O00506 426 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 ZC3H11AO75152 810 aaKnown RBP eCLIP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 E2F6O75461 281 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 SLC26A2P50443 739 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 CAPRIN1Q14444 709 aaKnown RBP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 GOLGA7BQ2TAP0 167 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 GLT1D1Q96MS3 346 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 GPBP1L1Q9HC44 474 aaPredicted RBP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 NEU2Q9Y3R4 380 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 TTC30AQ86WT1 665 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 ANKMY2Q8IV38 441 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 ST13P4Q8IZP2 240 aaPredicted RBP19.9■□□□□ 0.78
PTPRE-201ENST00000254667 PBXIP1Q96AQ6 731 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 KIAA1257Q9ULG3 409 aa19.9■□□□□ 0.78
PTPRE-201ENST00000254667 ZNF185O15231 689 aa19.89■□□□□ 0.78
PTPRE-201ENST00000254667 NLRP11P59045 1033 aaKnown RBP19.89■□□□□ 0.78
PTPRE-201ENST00000254667 NFIAQ12857 509 aa19.89■□□□□ 0.78
PTPRE-201ENST00000254667 ZNF512Q96ME7 567 aaPredicted RBP19.89■□□□□ 0.78
PTPRE-201ENST00000254667 RUSC1Q9BVN2 902 aa19.89■□□□□ 0.78
PTPRE-201ENST00000254667 KCNF1Q9H3M0 494 aa19.89■□□□□ 0.78
PTPRE-201ENST00000254667 TRPC7Q9HCX4 862 aa19.89■□□□□ 0.78
PTPRE-201ENST00000254667 XPO7Q9UIA9 1087 aaKnown RBP19.89■□□□□ 0.78
PTPRE-201ENST00000254667 ALG6Q9Y672 507 aa19.89■□□□□ 0.78
PTPRE-201ENST00000254667 SUPT20HL2P0C7V6 817 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 CUL2Q13617 745 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 SEC23AQ15436 765 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 ZKSCAN4Q969J2 545 aaPredicted RBP19.89■□□□□ 0.77
PTPRE-201ENST00000254667 MS4A14Q96JA4 679 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 TEX12Q9BXU0 123 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 FAM49BQ9NUQ9 324 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 PSMC3IPQ9P2W1 217 aaPredicted RBP19.89■□□□□ 0.77
PTPRE-201ENST00000254667 GARTP22102 1010 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 CALML6Q8TD86 181 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 ANKS1AQ92625 1134 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 ASPSCR1Q9BZE9 553 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 IRX2Q9BZI1 471 aaPredicted RBP19.89■□□□□ 0.77
PTPRE-201ENST00000254667 CFAP73A6NFT4 308 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 HNRNPCL1O60812 293 aaKnown RBP19.89■□□□□ 0.77
PTPRE-201ENST00000254667 WEE2P0C1S8 567 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 FAM200BP0CF97 657 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 BOLA3Q53S33 107 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 FAM83AQ86UY5 434 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 RNF135Q8IUD6 432 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 HIPK4Q8NE63 616 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 CLMNQ96JQ2 1002 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 AIPL1Q9NZN9 384 aa19.89■□□□□ 0.77
PTPRE-201ENST00000254667 AARSP49588 968 aaKnown RBP eCLIP19.88■□□□□ 0.77
PTPRE-201ENST00000254667 RBBP7Q16576 425 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 PCNX4Q63HM2 1172 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 PLEKHH3Q7Z736 793 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 N4BP2L2Q92802 583 aaPredicted RBP19.88■□□□□ 0.77
PTPRE-201ENST00000254667 MTFR1LQ9H019 292 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 PRRG1O14668 218 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 PTK2BQ14289 1009 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 TMCO4Q5TGY1 634 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 PIP4K2CQ8TBX8 421 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 MAGEA9P43362 315 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 SERPINB4P48594 390 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms