RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 C12orf50Q8NA57 414 aaPredicted RBP18.06■□□□□ 0.48
FOXA1-201ENST00000250448 TMEM143Q96AN5 459 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 ZIC5Q96T25 663 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 PCDHB18PQ96TA0 734 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 CDC42EP4Q9H3Q1 356 aaKnown RBP18.06■□□□□ 0.48
FOXA1-201ENST00000250448 USP20Q9Y2K6 914 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 USP15Q9Y4E8 981 aaPredicted RBP18.06■□□□□ 0.48
FOXA1-201ENST00000250448 SPOPO43791 374 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 ATG7O95352 703 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 KCNJ1P48048 391 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 CALCOCO2Q13137 446 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 LONRF1Q17RB8 773 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 ZNF792Q3KQV3 632 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 METTL7BQ6UX53 244 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 HAUS6Q7Z4H7 955 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 DPP9Q86TI2 863 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 CPNE8Q86YQ8 564 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 ZSWIM2Q8NEG5 633 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 MGARPQ8TDB4 240 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 DDX23Q9BUQ8 820 aaKnown RBP18.06■□□□□ 0.48
FOXA1-201ENST00000250448 MORF4L1Q9UBU8 362 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 MAFBQ9Y5Q3 323 aaPredicted RBP18.06■□□□□ 0.48
FOXA1-201ENST00000250448 ECEL1O95672 775 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 OATP04181 439 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 CLNS1AP54105 237 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 CETN1Q12798 172 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 MYBPC2Q14324 1141 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 LRRC14Q15048 493 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 ZNF568Q3ZCX4 644 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 ACCSLQ4AC99 568 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 EPC2Q52LR7 807 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 SPATA33Q96N06 139 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 FGFR1OP2Q9NVK5 253 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 TRPM7Q96QT4 1865 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 NOP56O00567 594 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 NQO1P15559 274 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 NPTX2P47972 431 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 STAT5BP51692 787 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 XKR3Q5GH77 459 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 INTS8Q75QN2 995 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 MIEF2Q96C03 454 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 ZBTB10Q96DT7 871 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 STAMBPL1Q96FJ0 436 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 MPHOSPH6Q99547 160 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 STRA6Q9BX79 667 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 TCP11X1B4DZS4 312 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 SGPL1O95470 568 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 TGFB3P10600 412 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 CHRNB2P17787 502 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 PPP3CAQ08209 521 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 TAF1CQ15572 869 aaPredicted RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 CELF3Q5SZQ8 465 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 CCDC62Q6P9F0 684 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 ZNF564Q8TBZ8 553 aaPredicted RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 CCHCR1Q8TD31 782 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 GTF3C2Q8WUA4 911 aaPredicted RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
FOXA1-201ENST00000250448 ARHGEF2Q92974 986 aaKnown RBP18.05■□□□□ 0.48
FOXA1-201ENST00000250448 ADGRA3Q8IWK6 1321 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 TMEM120BA0PK00 339 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 SCP2P22307 547 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 GBP2P32456 591 aaPredicted RBP18.04■□□□□ 0.48
FOXA1-201ENST00000250448 VAMP7P51809 220 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 POLGP54098 1239 aaPredicted RBP18.04■□□□□ 0.48
FOXA1-201ENST00000250448 KCNJ2P63252 427 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 RGMBQ6NW40 437 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 NOP9Q86U38 636 aaKnown RBP18.04■□□□□ 0.48
FOXA1-201ENST00000250448 EPS8L1Q8TE68 723 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 KAT5Q92993 513 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 BTBD6Q96KE9 485 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 SERPINB12Q96P63 405 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 GPR20Q99678 358 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 NUP85Q9BW27 656 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 ECT2Q9H8V3 914 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 EBF2Q9HAK2 575 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 AAASQ9NRG9 546 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 ARID2Q68CP9 1835 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 P4HA2O15460 535 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 SUN1O94901 812 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 ACSL3O95573 720 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 GZMAP12544 262 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 ADCYAP1R1P41586 468 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 GCLMP48507 274 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 ZNF268Q14587 947 aaPredicted RBP18.04■□□□□ 0.48
FOXA1-201ENST00000250448 VSTM1Q6UX27 236 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 WHRNQ9P202 907 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 GGT7Q9UJ14 662 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 NOCTQ9UK39 431 aaKnown RBP18.04■□□□□ 0.48
FOXA1-201ENST00000250448 DNAH12Q6ZR08 3092 aa18.04■□□□□ 0.48
FOXA1-201ENST00000250448 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-201ENST00000250448 FAM110CQ1W6H9 321 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 GALNTL6Q49A17 601 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 POP1Q99575 1024 aaKnown RBP18.03■□□□□ 0.48
FOXA1-201ENST00000250448 CBWD1Q9BRT8 395 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 POLR3FQ9H1D9 316 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-201ENST00000250448 LRRC19Q9H756 370 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 ABT1Q9ULW3 272 aaKnown RBP18.03■□□□□ 0.48
FOXA1-201ENST00000250448 IGKV6D-21A0A0A0MT36 114 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 A0A1B0GUA9 196 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms