RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GZMAP12544 262 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 ITGA4P13612 1032 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 ATF7P17544 494 aaPredicted RBP20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 CHRNB2P17787 502 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 ASPAP45381 313 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 NOP2P46087 812 aaKnown RBP20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 GUCY2FP51841 1108 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 GALCP54803 685 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 FMO1Q01740 532 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 TRIM71Q2Q1W2 868 aaKnown RBP20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 GLRA4Q5JXX5 417 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 ZMAT2Q96NC0 199 aaKnown RBP20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 AGO3Q9H9G7 860 aaKnown RBP20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 ERVK-5Q9HDB9 667 aa20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 PUF60Q9UHX1 559 aaKnown RBP20.03■□□□□ 0.8
TNFSF9-201ENST00000245817 SMIM28A0A1B0GU29 152 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 ANKRD62A6NC57 917 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 STAU1O95793 577 aaKnown RBP20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 FTLP02792 175 aaPredicted RBP20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 TMEM253P0C7T8 217 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 CKBP12277 381 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 TUBB2AQ13885 445 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 ZBTB6Q15916 424 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 TUBB2BQ9BVA1 445 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 TMEM106CQ9BVX2 250 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 CYP3A43Q9HB55 503 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 POLIQ9UNA4 740 aa20.02■□□□□ 0.8
TNFSF9-201ENST00000245817 THAP12O43422 761 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 KCNE1P15382 129 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 ABCB4P21439 1286 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 RAB27AP51159 221 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 TERF1P54274 439 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 LPIN1Q14693 890 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 OLIG1Q8TAK6 271 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 CXorf38Q8TB03 319 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 DDX1Q92499 740 aaKnown RBP20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 MMS19Q96T76 1030 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 ISCUQ9H1K1 167 aa20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 KIAA0100Q14667 2235 aaKnown RBP20.01■□□□□ 0.79
TNFSF9-201ENST00000245817 A0A0A6YYK5 440 aaPredicted RBP20■□□□□ 0.79
TNFSF9-201ENST00000245817 XKR4Q5GH76 650 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 TRIM72Q6ZMU5 477 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 DNAAF5Q86Y56 855 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 TTC39CQ8N584 583 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 UBR7Q8N806 425 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 CAGE1Q8TC20 777 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 RPS6KC1Q96S38 1066 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 PCDHB18PQ96TA0 734 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 BCO2Q9BYV7 579 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 TAS2R14Q9NYV8 317 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 TUBGCP4Q9UGJ1 667 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 JRKLQ9Y4A0 524 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 ANK1P16157 1881 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 ANO9A1A5B4 782 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 FANCGO15287 622 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 SKIP12755 728 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 CYP3A5P20815 502 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 ZNF394Q53GI3 561 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 PALB2Q86YC2 1186 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 LRRC52Q8N7C0 313 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 C18orf25Q96B23 403 aaPredicted RBP20■□□□□ 0.79
TNFSF9-201ENST00000245817 FAM124BQ9H5Z6 455 aaPredicted RBP20■□□□□ 0.79
TNFSF9-201ENST00000245817 SALL4Q9UJQ4 1053 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 OGDHLQ9ULD0 1010 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 CAPN6Q9Y6Q1 641 aa20■□□□□ 0.79
TNFSF9-201ENST00000245817 GPC5P78333 572 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 BFSP2Q13515 415 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 CLEC16AQ2KHT3 1053 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 ACAD10Q6JQN1 1059 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 PPP1R2P3Q6NXS1 205 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 MYRIPQ8NFW9 859 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 PGBD4Q96DM1 585 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 ZNF560Q96MR9 790 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 CXCL16Q9H2A7 254 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 L2HGDHQ9H9P8 463 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 SLC38A7Q9NVC3 462 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 GIT1Q9Y2X7 761 aa19.99■□□□□ 0.79
TNFSF9-201ENST00000245817 CALCAP01258 141 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 TFRCP02786 760 aaKnown RBP19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 PNPLA4P41247 253 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 RAP1GAPP47736 663 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 ZNF132P52740 706 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 C9orf57Q5W0N0 161 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 RHOT2Q8IXI1 618 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 TMEM130Q8N3G9 435 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 RFFLQ8WZ73 363 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 ADAM2Q99965 735 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 TRAIPQ9BWF2 469 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 THAP2Q9H0W7 228 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 RNF19AQ9NV58 838 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 CITO14578 2027 aa19.98■□□□□ 0.79
TNFSF9-201ENST00000245817 ENC1O14682 589 aa19.97■□□□□ 0.79
TNFSF9-201ENST00000245817 MED7O43513 233 aa19.97■□□□□ 0.79
TNFSF9-201ENST00000245817 PALMO75781 387 aa19.97■□□□□ 0.79
TNFSF9-201ENST00000245817 CDK7P50613 346 aa19.97■□□□□ 0.79
TNFSF9-201ENST00000245817 CDH8P55286 799 aa19.97■□□□□ 0.79
TNFSF9-201ENST00000245817 ZNF606Q8WXB4 792 aa19.97■□□□□ 0.79
TNFSF9-201ENST00000245817 CALR3Q96L12 384 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms