RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MED4Q9NPJ6 270 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 RBM12Q9NTZ6 932 aaKnown RBP18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 SNTG2Q9NY99 539 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 PCDHGC5Q9Y5F6 944 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 DNA2P51530 1060 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 CYP24A1Q07973 514 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 BFSP1Q12934 665 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 MYBPC2Q14324 1141 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 GBP6Q6ZN66 633 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 MEIS3P2A8K0S8 358 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 MEFVO15553 781 aaPredicted RBP18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 MCF2P10911 925 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 TCTN1Q2MV58 587 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 MEI1Q5TIA1 1274 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 GJB7Q6PEY0 223 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 DNAAF5Q86Y56 855 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 RNF169Q8NCN4 708 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 DBF4BQ8NFT6 615 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 ADAM2Q99965 735 aa18.19■□□□□ 0.5
CDKN1A-201ENST00000244741 GRID2IPA4D2P6 1211 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 KRT13P13646 458 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 VAMP7P51809 220 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 HNRNPH2P55795 449 aaKnown RBP18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 PCBP1Q15365 356 aaKnown RBP eCLIP18.18■□□□□ 0.51e-11■■■■■ 48.5
CDKN1A-201ENST00000244741 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 TMEM174Q8WUU8 243 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 LPPQ93052 612 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 MKNK1Q9BUB5 465 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.18■□□□□ 0.52e-9■■■■■ 223.6
CDKN1A-201ENST00000244741 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 CPSF3Q9UKF6 684 aaKnown RBP18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 BZW2Q9Y6E2 419 aaKnown RBP18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 LDHAP00338 332 aaKnown RBP18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 AXLP30530 894 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 GCLMP48507 274 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 JAM2P57087 298 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 C1orf220Q5T0J3 134 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 ELMO3Q96BJ8 720 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 MFSD14AQ96MC6 490 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 IPPQ9Y573 584 aa18.18■□□□□ 0.5
CDKN1A-201ENST00000244741 PTPRJQ12913 1337 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 PRKCIP41743 596 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 PPP3CAQ08209 521 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 INTS8Q75QN2 995 aaKnown RBP18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 RTN4RL1Q86UN2 441 aaPredicted RBP18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 SMG8Q8ND04 991 aaKnown RBP18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 PARD3BQ8TEW8 1205 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 RIN2Q8WYP3 895 aaPredicted RBP18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 RUBCNQ92622 972 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 RNF14Q9UBS8 474 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 NAGPAQ9UK23 515 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 PCDHB2Q9Y5E7 798 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 BTNL10A8MVZ5 291 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 AGPSO00116 658 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 RNF40O75150 1001 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 DCAF4L1Q3SXM0 396 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 CBWD6Q4V339 395 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 CBWD3Q5JTY5 395 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 CBWD5Q5RIA9 395 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 C10orf76Q5T2E6 689 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 SCARA3Q6AZY7 606 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 USP38Q8NB14 1042 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 RPF1Q9H9Y2 349 aaKnown RBP18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 FAM105AQ9NUU6 356 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 STIM2Q9P246 746 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 PARP2Q9UGN5 583 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 FBXL5Q9UKA1 691 aa18.17■□□□□ 0.5
CDKN1A-201ENST00000244741 GTPBP10A4D1E9 387 aaKnown RBP18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 LRRN2O75325 713 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 TNNI1P19237 187 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 GGCXP38435 758 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 SLC10A6Q3KNW5 377 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 SND1Q7KZF4 910 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 C7orf61Q8IZ16 206 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 ACAP3Q96P50 834 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 FNBP1Q96RU3 617 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 KIAA1586Q9HCI6 787 aa18.16■□□□□ 0.5
CDKN1A-201ENST00000244741 LACTBL1A8MY62 500 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 KIAA0391O15091 583 aaKnown RBP18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 CLTAP09496 248 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 CSF2RAP15509 400 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 RAG1P15918 1043 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 SYN1P17600 705 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 GLRA4Q5JXX5 417 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 C8orf74Q6P047 294 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 BRSK2Q8IWQ3 736 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 LINC01599Q8WXQ3 324 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 ZNF516Q92618 1163 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 FAM204AQ9H8W3 233 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 NENFQ9UMX5 172 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 LAMA3Q16787 3333 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 CEP290O15078 2479 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 RECQL4O94761 1208 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 DSC3Q14574 896 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 PLEKHG4Q58EX7 1191 aa18.15■□□□□ 0.5
CDKN1A-201ENST00000244741 OR5B17Q8NGF7 314 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms