RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 TPD52L1Q16890 204 aaPredicted RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 C1orf220Q5T0J3 134 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 C9orf57Q5W0N0 161 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 SCARA3Q6AZY7 606 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 VPS52Q8N1B4 723 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 HERC2P3Q9BVR0 1158 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 SLC16A3O15427 465 aaKnown RBP16.79■□□□□ 0.28
RAB38-201ENST00000243662 CCP110O43303 1012 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 TADA2AO75478 443 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 SOD2P04179 222 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 DLATP10515 647 aaKnown RBP16.79■□□□□ 0.28
RAB38-201ENST00000243662 CTSAP10619 480 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 ZNF18P17022 549 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 DLG4P78352 724 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 DUOXA2Q1HG44 320 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 PDE12Q6L8Q7 609 aaKnown RBP16.79■□□□□ 0.28
RAB38-201ENST00000243662 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
RAB38-201ENST00000243662 TAS1R1Q7RTX1 841 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 VSTM4Q8IW00 320 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 FNBP1Q96RU3 617 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 FANCLQ9NW38 375 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 IRAK3Q9Y616 596 aa16.79■□□□□ 0.28
RAB38-201ENST00000243662 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB38-201ENST00000243662 LILRB3O75022 631 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 TMEM191BP0C7N4 346 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 FOSL2P15408 326 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 TNNI1P19237 187 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 BRCC3P46736 316 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 VAMP7P51809 220 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 BFSP1Q12934 665 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 ANKRD36BP1Q96IX9 119 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 TCF25Q9BQ70 676 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 PCDHGC5Q9Y5F6 944 aa16.78■□□□□ 0.28
RAB38-201ENST00000243662 ITGB3P05106 788 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 ATP1A3P13637 1013 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 TNNT1P13805 278 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 IGFBP4P22692 258 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 LILRA4P59901 499 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.28
RAB38-201ENST00000243662 ARID5BQ14865 1188 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 TIGD5Q53EQ6 642 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 NYAP1Q6ZVC0 841 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 TRAPPC11Q7Z392 1133 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 TMC7Q7Z402 723 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 GPR65Q8IYL9 337 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.28
RAB38-201ENST00000243662 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 SUSD3Q96L08 255 aa16.77■□□□□ 0.28
RAB38-201ENST00000243662 NGRNQ9NPE2 291 aaKnown RBP16.77■□□□□ 0.28
RAB38-201ENST00000243662 I3L4J1 428 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 M0QZQ0 153 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 SPTLC1O15269 473 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 TNNC2P02585 160 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 C4BPAP04003 597 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 EPB41P11171 864 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 FGFR3P22607 806 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 PAX3P23760 479 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 POLR2BP30876 1174 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 AP3M2P53677 418 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 MARSP56192 900 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 DSG1Q02413 1049 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 PTPN14Q15678 1187 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 USP41Q3LFD5 358 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 C15orf39Q6ZRI6 1047 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 LRRC52Q8N7C0 313 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 NSUN3Q9H649 340 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 NFE2L3Q9Y4A8 694 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 PLXNA3P51805 1871 aa16.76■□□□□ 0.27
RAB38-201ENST00000243662 MTCL1Q9Y4B5 1905 aaKnown RBP16.76■□□□□ 0.27
RAB38-201ENST00000243662 C2orf71A6NGG8 1288 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 HIDE1A8MVS5 230 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 TRAPPC3O43617 180 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 KRT13P13646 458 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 GLUD2P49448 558 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
RAB38-201ENST00000243662 ZACNQ401N2 412 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 PLPP4Q5VZY2 271 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 FRMD5Q7Z6J6 570 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 ADGRD2Q7Z7M1 963 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 AUTS2Q8WXX7 1259 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 B3GALT6Q96L58 329 aa16.75■□□□□ 0.27
RAB38-201ENST00000243662 C16orf45Q96MC5 204 aaPredicted RBP16.75■□□□□ 0.27
RAB38-201ENST00000243662 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms