RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PLCG1P19174 1290 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 HOXA7P31268 230 aaPredicted RBP21.05■□□□□ 0.96
HOXC13-201ENST00000243056 MRPS9P82933 396 aaKnown RBP21.05■□□□□ 0.96
HOXC13-201ENST00000243056 GRM1Q13255 1194 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 SNAPC2Q13487 334 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CABP7Q86V35 215 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 BRI3BPQ8WY22 251 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 RMDN3Q96TC7 470 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 STMN4Q9H169 189 aaPredicted RBP21.05■□□□□ 0.96
HOXC13-201ENST00000243056 DISC1Q9NRI5 854 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 ARHGEF38Q9NXL2 777 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 DDX43Q9NXZ2 648 aaKnown RBP21.05■□□□□ 0.96
HOXC13-201ENST00000243056 PASKQ96RG2 1323 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CCL15-CCL14A0A0B4J2E2 113 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 DDX39AO00148 427 aaKnown RBP21.05■□□□□ 0.96
HOXC13-201ENST00000243056 LAD1O00515 517 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CHMP2AO43633 222 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 SORBS3O60504 671 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CNMDO75829 334 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 SERPING1P05155 500 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 MARK3P27448 753 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 STK4Q13043 487 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 SLC18A3Q16572 532 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CCL15Q16663 113 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 ACSBG2Q5FVE4 666 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 WDR78Q5VTH9 848 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 OLFML1Q6UWY5 402 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 DNAAF5Q86Y56 855 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 SCUBE1Q8IWY4 988 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 DTX3LQ8TDB6 740 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 MIPEPQ99797 713 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 PTPN18Q99952 460 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CCDC28BQ9BUN5 200 aa21.05■□□□□ 0.96
HOXC13-201ENST00000243056 LUC7LQ9NQ29 371 aaKnown RBP21.05■□□□□ 0.96
HOXC13-201ENST00000243056 CYP3A7-CYP3A51PA0A087WV96 503 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 BTBD19C9JJ37 291 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 CYP3A7P24462 503 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 COPB2P35606 906 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 MAP7Q14244 749 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 KCNK18Q7Z418 384 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 CFAP61Q8NHU2 1237 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 FAM81BQ96LP2 452 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.04■□□□□ 0.96
HOXC13-201ENST00000243056 BCAS3Q9H6U6 928 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 MLH1P40692 756 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 TMED1Q13445 227 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 HS2ST1Q7LGA3 356 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 TMEM110Q86TL2 294 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 PPP1R14BQ96C90 147 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 NMD3Q96D46 503 aaKnown RBP21.04■□□□□ 0.96
HOXC13-201ENST00000243056 CATSPER2Q96P56 530 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 TLE6Q9H808 572 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 SNX24Q9Y343 169 aa21.04■□□□□ 0.96
HOXC13-201ENST00000243056 MAP3K7O43318 606 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 FCER1AP12319 257 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 CD97P48960 835 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 MFSD5Q6N075 450 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 CCDC80Q76M96 950 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 PALB2Q86YC2 1186 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 MCF2L2Q86YR7 1114 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 ARHGEF2Q92974 986 aaKnown RBP21.03■□□□□ 0.96
HOXC13-201ENST00000243056 OLFM3Q96PB7 478 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 ERP44Q9BS26 406 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 SPATC1LQ9H0A9 340 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 GPBP1L1Q9HC44 474 aaPredicted RBP21.03■□□□□ 0.96
HOXC13-201ENST00000243056 ADAMTS1Q9UHI8 967 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 TRIM43BA6NCK2 446 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 BOLA2-SMG1P6H3BVE0 249 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 PGK2P07205 417 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 PABPC4LP0CB38 370 aaKnown RBP21.03■□□□□ 0.96
HOXC13-201ENST00000243056 GRIA2P42262 883 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 SH3BGRP55822 239 aaPredicted RBP21.03■□□□□ 0.96
HOXC13-201ENST00000243056 GSTM4Q03013 218 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 CEP55Q53EZ4 464 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 MBOAT7Q96N66 472 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 SEMA6BQ9H3T3 888 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 KCNK9Q9NPC2 374 aa21.03■□□□□ 0.96
HOXC13-201ENST00000243056 ASTN1O14525 1302 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 PDHXO00330 501 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 EML1O00423 815 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 RIPK2O43353 540 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 PSMG1O95456 288 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 ZFXP17010 805 aaPredicted RBP21.02■□□□□ 0.96
HOXC13-201ENST00000243056 HOXD12P35452 270 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 GALK1P51570 392 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 YARSP54577 528 aaKnown RBP21.02■□□□□ 0.96
HOXC13-201ENST00000243056 CYP4A11Q02928 519 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 PGM5Q15124 567 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 TRMT1LQ7Z2T5 733 aaKnown RBP21.02■□□□□ 0.96
HOXC13-201ENST00000243056 PPFIBP2Q8ND30 876 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 SNX29Q8TEQ0 813 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 HAUS1Q96CS2 278 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 LRRC37BQ96QE4 947 aa21.02■□□□□ 0.96
HOXC13-201ENST00000243056 MEIS1O00470 390 aa21.02■□□□□ 0.95
HOXC13-201ENST00000243056 TRAFD1O14545 582 aaPredicted RBP21.02■□□□□ 0.95
HOXC13-201ENST00000243056 OR6B1O95007 311 aa21.02■□□□□ 0.95
HOXC13-201ENST00000243056 CIITAP33076 1130 aa21.02■□□□□ 0.95
HOXC13-201ENST00000243056 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.95
HOXC13-201ENST00000243056 ADARP55265 1226 aaKnown RBP21.02■□□□□ 0.95
HOXC13-201ENST00000243056 GRB10Q13322 594 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms