RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ITGA4P13612 1032 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 ATICP31939 592 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 ASPAP45381 313 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 ZNF211Q13398 564 aaPredicted RBP24.79■■□□□ 1.56
MSX2-201ENST00000239243 PASD1Q8IV76 773 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 ZNF518BQ9C0D4 1074 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 ST7Q9NRC1 585 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 SETD4Q9NVD3 440 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 MROH7Q68CQ1 1323 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 NFICP08651 508 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 CARSP49589 748 aaKnown RBP24.78■■□□□ 1.56
MSX2-201ENST00000239243 PCBP1Q15365 356 aaKnown RBP eCLIP24.78■■□□□ 1.56
MSX2-201ENST00000239243 OLFML2BQ68BL8 750 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 SCARA3Q6AZY7 606 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 RGMBQ6NW40 437 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 TLK2Q86UE8 772 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 WHAMMQ8TF30 809 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 IFT81Q8WYA0 676 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 CCDC102AQ96A19 550 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 C11orf70Q9BRQ4 267 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 DCAF4L1Q3SXM0 396 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 JADE1Q6IE81 842 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 C17orf99Q6UX52 265 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 CD302Q8IX05 232 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 FAM71BQ8TC56 605 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 CASKIN2Q8WXE0 1202 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 SOCS4Q8WXH5 440 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 GDAP1L1Q96MZ0 367 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 NFU1Q9UMS0 254 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 CEP83Q9Y592 693 aa24.78■■□□□ 1.56
MSX2-201ENST00000239243 ZNF865P0CJ78 1059 aaPredicted RBP24.77■■□□□ 1.56
MSX2-201ENST00000239243 RGS2P41220 211 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 MARCKSL1P49006 195 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 CPT1AP50416 773 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 C1orf127Q8N9H9 656 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 TMEM35BQ8NCS4 154 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 USP6NLQ92738 828 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 ACAP3Q96P50 834 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 GCOM2Q9BZD3 368 aaPredicted RBP24.77■■□□□ 1.56
MSX2-201ENST00000239243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.77■■□□□ 1.56
MSX2-201ENST00000239243 AMACRQ9UHK6 382 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 LCMT1Q9UIC8 334 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.77■■□□□ 1.56
MSX2-201ENST00000239243 SMIM35A0A1B0GVV1 85 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 ZSCAN5CA6NGD5 496 aaPredicted RBP24.77■■□□□ 1.56
MSX2-201ENST00000239243 H3BQF6 201 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 CALB1P05937 261 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 SMIM10L2AP0DMW4 78 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 SMIM10L2BP0DMW5 78 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 P4HA1P13674 534 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 PRAMEF19Q5SWL8 479 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 PLEKHA7Q6IQ23 1121 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 BCO2Q9BYV7 579 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 VRTNQ9H8Y1 702 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 PARVAQ9NVD7 372 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 SIX4Q9UIU6 781 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 PCDHGC3Q9UN70 934 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 Q9Y3F1 56 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 C2CD2Q9Y426 696 aa24.77■■□□□ 1.56
MSX2-201ENST00000239243 ESYT3A0FGR9 886 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 CFHP08603 1231 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 WEE2P0C1S8 567 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 TMEM132DQ14C87 1099 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 SLC10A6Q3KNW5 377 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 SCARA5Q6ZMJ2 495 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 IFNL1Q8IU54 200 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 NXF1Q9UBU9 619 aaKnown RBP24.76■■□□□ 1.55
MSX2-201ENST00000239243 MTUS1Q9ULD2 1270 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 UTP11Q9Y3A2 253 aaKnown RBP24.76■■□□□ 1.55
MSX2-201ENST00000239243 MGAMO43451 1857 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 BHMG1C9JSJ3 638 aaPredicted RBP24.76■■□□□ 1.55
MSX2-201ENST00000239243 MMP8P22894 467 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 DHX34Q14147 1143 aaKnown RBP24.76■■□□□ 1.55
MSX2-201ENST00000239243 SAPCD2Q86UD0 394 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.76■■□□□ 1.55
MSX2-201ENST00000239243 RAB17Q9H0T7 212 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 ZFYVE28Q9HCC9 887 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 FLRT1Q9NZU1 646 aa24.76■■□□□ 1.55
MSX2-201ENST00000239243 POLR3GO15318 223 aaPredicted RBP24.75■■□□□ 1.55
MSX2-201ENST00000239243 MED7O43513 233 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 PROSCO94903 275 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 ITGB3P05106 788 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 EIF4BP23588 611 aaKnown RBP24.75■■□□□ 1.55
MSX2-201ENST00000239243 GRM5P41594 1212 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 LACTBP83111 547 aaPredicted RBP24.75■■□□□ 1.55
MSX2-201ENST00000239243 PTP4A2Q12974 167 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 WDR72Q3MJ13 1102 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 MMS22LQ6ZRQ5 1243 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 APBA2Q99767 749 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 ADAMTS10Q9H324 1103 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 FAM124BQ9H5Z6 455 aaPredicted RBP24.75■■□□□ 1.55
MSX2-201ENST00000239243 ITGA11Q9UKX5 1188 aa24.75■■□□□ 1.55
MSX2-201ENST00000239243 MBLAC1A4D2B0 266 aaPredicted RBP24.74■■□□□ 1.55
MSX2-201ENST00000239243 GOLGA6BA6NDN3 693 aa24.74■■□□□ 1.55
MSX2-201ENST00000239243 PHF2O75151 1096 aa24.74■■□□□ 1.55
MSX2-201ENST00000239243 PAEPP09466 180 aa24.74■■□□□ 1.55
MSX2-201ENST00000239243 PYGMP11217 842 aa24.74■■□□□ 1.55
MSX2-201ENST00000239243 CHRNA3P32297 505 aa24.74■■□□□ 1.55
MSX2-201ENST00000239243 MAMLD1Q13495 774 aa24.74■■□□□ 1.55
MSX2-201ENST00000239243 MFSD10Q14728 455 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms