RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 DAB2P98082 770 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 TRIM25Q14258 630 aaKnown RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 SYDE2Q5VT97 1194 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 KLHDC10Q6PID8 442 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 SLC10A4Q96EP9 437 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 PACSIN1Q9BY11 444 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 BAIAP3O94812 1187 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 GUCY1A2P33402 732 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 ABL2P42684 1182 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 CD97P48960 835 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 CTTNQ14247 550 aaKnown RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 LRRC8EQ6NSJ5 796 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 C7orf25Q9BPX7 421 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 ADAM33Q9BZ11 813 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 TRIM9Q9C026 710 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 GUCY1B2O75343 617 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 CIAO1O76071 339 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 C15orf59Q2T9L4 293 aaPredicted RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 SETD3Q86TU7 594 aaPredicted RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 TCAIMQ8N3R3 496 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 DHRS1Q96LJ7 313 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 MKNK1Q9BUB5 465 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 SH3GLB2Q9NR46 395 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 MOSPD1Q9UJG1 213 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 A0A0J9YVX5 310 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 SNTNA6NMZ2 147 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 FECHP22830 423 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 IFNA8P32881 189 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 TRADDQ15628 312 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 GLT8D2Q9H1C3 349 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 COMMD10Q9Y6G5 202 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 XDHP47989 1333 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 SAC3D1A6NKF1 404 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 KPNA7A9QM74 516 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 H3BNX3 289 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ENO2P09104 434 aaPredicted RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 TTI2Q6NXR4 508 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 SPTLC1O15269 473 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ENO3P13929 434 aaPredicted RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 KCNJ1P48048 391 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 IST1P53990 364 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ZNF846Q147U1 533 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 EFTUD2Q15029 972 aaKnown RBP eCLIP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 PURBQ96QR8 312 aaKnown RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 AGXT2Q9BYV1 514 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 TRIM39Q9HCM9 518 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 DSEQ9UL01 958 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 KIAA1024Q9UPX6 916 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 SPEF1Q9Y4P9 236 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 NPHP3-ACAD11A0A0J9YXS1 232 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 LOC100653049A0A140TA62 436 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 EVPLLA8MZ36 301 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 KRT34O76011 436 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 IREB2P48200 963 aaKnown RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ISLR2Q6UXK2 745 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ANAPC7Q9UJX3 599 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 NEDD4P46934 1319 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 BOLA2-SMG1P6H3BVE0 249 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 VWA5AO00534 786 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 CLDN3O15551 220 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 LDHCP07864 332 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 UCHL3P15374 230 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 HALP42357 657 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 NSMFQ6X4W1 530 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 NLRP10Q86W26 655 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 PPM1NQ8N819 430 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
VAMP4-201ENST00000236192 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 AURKCQ9UQB9 309 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 JCADQ9P266 1359 aa13.49□□□□□ -0.25
VAMP4-201ENST00000236192 GYS1P13807 737 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 PTGS2P35354 604 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
VAMP4-201ENST00000236192 PPP1R2P3Q6NXS1 205 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 AGBL1Q96MI9 1066 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 BTBD9Q96Q07 612 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 ALG6Q9Y672 507 aa13.48□□□□□ -0.25
VAMP4-201ENST00000236192 CHI3L2Q15782 390 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms