RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CABP7Q86V35 215 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 EME1Q96AY2 570 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 STRBPQ96SI9 672 aaKnown RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 MAK16Q9BXY0 300 aaKnown RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 NINJ2Q9NZG7 142 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 KLRF2D3W0D1 207 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 TNFRSF10AO00220 468 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 HOXD13P35453 343 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 COILP38432 576 aaPredicted RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 NR1H3Q13133 447 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 ACAP1Q15027 740 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 UBE3CQ15386 1083 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 KYAT3Q6YP21 454 aaKnown RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 C11orf74Q86VG3 221 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 FBXO27Q8NI29 283 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 SLC35G2Q8TBE7 412 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 MTBPQ96DY7 904 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 RETREG1Q9H6L5 497 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
MSH2-201ENST00000233146 NCANO14594 1321 aa13.73□□□□□ -0.21
MSH2-201ENST00000233146 THAP12O43422 761 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 BAIAP3O94812 1187 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 TNFAIP8O95379 198 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PLEKHA8P1O95397 391 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PMLP29590 882 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 RPA3P35244 121 aaPredicted RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 GALCP54803 685 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 AMPD3Q01432 767 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 E2F2Q14209 437 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 STAT4Q14765 748 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 SEPT7Q16181 437 aaKnown RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 MAPK6Q16659 721 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 DPY19L2P1Q6NXN4 242 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PROM2Q8N271 834 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 CENPSQ8N2Z9 138 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 ZNF594Q96JF6 807 aaPredicted RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 VTA1Q9NP79 307 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 SYNGAP1Q96PV0 1343 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 A0A0G2JND7 137 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 FDFT1P37268 417 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 NCKAP1LP55160 1127 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 UBE4AQ14139 1066 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 TMED2Q15363 201 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 NDUFA5Q16718 116 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 IFNL3Q8IZI9 196 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 ICA1LQ8NDH6 482 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 RBM15BQ8NDT2 890 aaKnown RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 KCNK13Q9HB14 408 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 GIN1Q9NXP7 522 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PCDHA4Q9UN74 947 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 PCDHB2Q9Y5E7 798 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 MAD1L1Q9Y6D9 718 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 K7EPI3 171 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 PON1P27169 355 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 NUP107P57740 925 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 MYBPC1Q00872 1141 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 ZBTB16Q05516 673 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 DCAF6Q58WW2 860 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 CCDC105Q8IYK2 499 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
MSH2-201ENST00000233146 PCDHGB4Q9UN71 923 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 PCDHGB5Q9Y5G0 923 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 KIF13BQ9NQT8 1826 aa13.72□□□□□ -0.21
MSH2-201ENST00000233146 CPA2P48052 419 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 RHBDL3P58872 404 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 MECOMQ03112 1051 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 OVGP1Q12889 678 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 RASA2Q15283 850 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 PAOXQ6QHF9 649 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 TTC7BQ86TV6 843 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 SLC25A41Q8N5S1 370 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 PYDC1Q8WXC3 89 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
MSH2-201ENST00000233146 CCDC77Q9BR77 488 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 CENPOQ9BU64 300 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 TRABDQ9H4I3 376 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 LIN28AQ9H9Z2 209 aaKnown RBP13.71□□□□□ -0.21
MSH2-201ENST00000233146 PADI4Q9UM07 663 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 H3BRJ5 948 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 CASQ2O14958 399 aaPredicted RBP13.71□□□□□ -0.21
MSH2-201ENST00000233146 DNAJA2O60884 412 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 GGPS1O95749 300 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 EIF2S1P05198 315 aaKnown RBP13.71□□□□□ -0.21
MSH2-201ENST00000233146 RBP3P10745 1247 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms