RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 HNRNPRO43390 633 aaKnown RBP10.29□□□□□ -0.76
TRIM23-201ENST00000231524 STAM2O75886 525 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 MMP10P09238 476 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 AKR1B1P15121 316 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 NT5C2P49902 561 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 GEMIN4P57678 1058 aaKnown RBP10.29□□□□□ -0.76
TRIM23-201ENST00000231524 TRPC3Q13507 836 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 COG2Q14746 738 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 KIF22Q14807 665 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 CDCA2Q69YH5 1023 aaPredicted RBP10.29□□□□□ -0.76
TRIM23-201ENST00000231524 DARS2Q6PI48 645 aaKnown RBP10.29□□□□□ -0.76
TRIM23-201ENST00000231524 C4orf50Q6ZRC1 276 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 PRUNE1Q86TP1 453 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 TCP10LQ8TDR4 215 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 GRHL1Q9NZI5 618 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 WDR35Q9P2L0 1181 aa10.29□□□□□ -0.76
TRIM23-201ENST00000231524 NWD1Q149M9 1564 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 MCF2LO15068 1137 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 PGM3O95394 542 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 CLPTM1O96005 669 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 MYCLP12524 364 aaPredicted RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 KRT10P13645 584 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 RPA1P27694 616 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 SCNN1BP51168 640 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 NFIXQ14938 502 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 INTS5Q6P9B9 1019 aaKnown RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 PTF1AQ7RTS3 328 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ALKBH8Q96BT7 664 aaKnown RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 LRRC4CQ9HCJ2 640 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ACP6Q9NPH0 428 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 VCAM1P19320 739 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 BGNP21810 368 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ECM1Q16610 540 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 DSTYKQ6XUX3 929 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 LRRC15Q8TF66 581 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ASCC2Q9H1I8 757 aaPredicted RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 FBXO6Q9NRD1 293 aaPredicted RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 IL1RAPL1Q9NZN1 696 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 IGSF9BQ9UPX0 1349 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ABL2P42684 1182 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 YARSP54577 528 aaKnown RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 PTK7Q13308 1070 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
TRIM23-201ENST00000231524 RFWD3Q6PCD5 774 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 MTHFD1LQ6UB35 978 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 VSTM1Q6UX27 236 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 LRRC43Q8N309 656 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ITFG2Q969R8 447 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 FERMT1Q9BQL6 677 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 FOXP3Q9BZS1 431 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 JMJD4Q9H9V9 463 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 LRRC42Q9Y546 428 aa10.28□□□□□ -0.76
TRIM23-201ENST00000231524 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.27□□□□□ -0.76
TRIM23-201ENST00000231524 EDF1O60869 148 aaKnown RBP10.27□□□□□ -0.76
TRIM23-201ENST00000231524 POLR2MP0CAP2 368 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 FOXN2P32314 431 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 TPD52P55327 224 aaPredicted RBP10.27□□□□□ -0.76
TRIM23-201ENST00000231524 PHEXP78562 749 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 TRMT5Q32P41 509 aaKnown RBP10.27□□□□□ -0.76
TRIM23-201ENST00000231524 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.76
TRIM23-201ENST00000231524 ANKRD20A4Q4UJ75 823 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 CBWD6Q4V339 395 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 ZNF394Q53GI3 561 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 CBWD3Q5JTY5 395 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 CBWD5Q5RIA9 395 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 KRT39Q6A163 491 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 PADI6Q6TGC4 694 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 OTOAQ7RTW8 1153 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 CPXCR1Q8N123 301 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 NDUFA13Q9P0J0 144 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 ATXN10Q9UBB4 475 aa10.27□□□□□ -0.76
TRIM23-201ENST00000231524 SLC16A4O15374 487 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 PDE5AO76074 875 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 SLC1A1P43005 524 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 PDK4Q16654 411 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 MARK2Q7KZI7 788 aaKnown RBP10.27□□□□□ -0.77
TRIM23-201ENST00000231524 SLC47A2Q86VL8 602 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 TMPRSS6Q8IU80 811 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 ACSF2Q96CM8 615 aaPredicted RBP10.27□□□□□ -0.77
TRIM23-201ENST00000231524 CNBD2Q96M20 576 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 SERPINI1Q99574 410 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 SIKE1Q9BRV8 207 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 ARL8BQ9NVJ2 186 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 MTMR4Q9NYA4 1195 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 PCDHA3Q9Y5H8 950 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 SCINQ9Y6U3 715 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 ATRNO75882 1429 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 GTPBP10A4D1E9 387 aaKnown RBP10.27□□□□□ -0.77
TRIM23-201ENST00000231524 WDR64B1ANS9 1081 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 SAT1P21673 171 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 BAG6P46379 1132 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 CENPCQ03188 943 aa10.27□□□□□ -0.77
TRIM23-201ENST00000231524 AP3B2Q13367 1082 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms