RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SSX2IPQ9Y2D8 614 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 EIF3DO15371 548 aaKnown RBP eCLIP14.48□□□□□ -0.09
NFKB1-201ENST00000226574 NOL4O94818 638 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 FSBPO95073 299 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 NR3C2P08235 984 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 TYK2P29597 1187 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 SERPINB4P48594 390 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 SLC12A3P55017 1021 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 DCAF15Q66K64 600 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 HDAC11Q96DB2 347 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 SH3GL2Q99962 352 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 TRIM56Q9BRZ2 755 aaKnown RBP14.48□□□□□ -0.09
NFKB1-201ENST00000226574 DNAJC18Q9H819 358 aa14.48□□□□□ -0.09
NFKB1-201ENST00000226574 PSMC3IPQ9P2W1 217 aaPredicted RBP14.48□□□□□ -0.09
NFKB1-201ENST00000226574 PDGFRAP16234 1089 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 TCN1P20061 433 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ANXA13P27216 316 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 CIITAP33076 1130 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 SREBF1P36956 1147 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 SEPT6Q14141 434 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 PLCB4Q15147 1175 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 LCA5Q86VQ0 697 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 RNF135Q8IUD6 432 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 PRELID2Q8N945 189 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 UBA3Q8TBC4 463 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 CDHR1Q96JP9 859 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 TMEM8AQ9HCN3 771 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 KCNA3P22001 575 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 NLRP11P59045 1033 aaKnown RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ROR1Q01973 937 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 FOXD4Q12950 439 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 TFDP2Q14188 446 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 FAM182AQ5T1J6 154 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 MAP3K21Q5TCX8 1036 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 C11orf63Q6NUN7 778 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 CNPY4Q8N129 248 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 SLC25A41Q8N5S1 370 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 TTYH3Q9C0H2 523 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ZC3H7BQ9UGR2 993 aaKnown RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ATP9BO43861 1147 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 GMNNO75496 209 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 LDHAP00338 332 aaKnown RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 KRT7P08729 469 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 EPHB2P29323 1055 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 HNRNPH3P31942 346 aaKnown RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ELF3P78545 371 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 BTKQ06187 659 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 SLC20A2Q08357 652 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 DUOXA2Q1HG44 320 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 TAF1BQ53T94 588 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ARSHQ5FYA8 562 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 FAM47CQ5HY64 1035 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 KRT80Q6KB66 452 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 RSPH3Q86UC2 560 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 CEP120Q8N960 986 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 RPAP3Q9H6T3 665 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-201ENST00000226574 ZNF302Q9NR11 478 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 TBX20Q9UMR3 447 aa14.47□□□□□ -0.09
NFKB1-201ENST00000226574 KIAA0391O15091 583 aaKnown RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 ZWINTO95229 277 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 GARSP41250 739 aaKnown RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 NPTX2P47972 431 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 CTCFP49711 727 aaPredicted RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 NUMBP49757 651 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 GABPAQ06546 454 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 SLC10A5Q5PT55 438 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 PCNX4Q63HM2 1172 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 NDUFAF2Q8N183 169 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 TTC13Q8NBP0 860 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 MTBPQ96DY7 904 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 RMDN2Q96LZ7 410 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 LRGUKQ96M69 825 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 TUBB6Q9BUF5 446 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 ARMCX1Q9P291 453 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 KLHL8Q9P2G9 620 aaPredicted RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 TCRBV7S2A1N4TA0A589 114 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 TRIM49D1C9J1S8 452 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 DNM1LO00429 736 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 CCDC22O60826 627 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 ETS1P14921 441 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 SLC1A1P43005 524 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 FNTAP49354 379 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 PKN2Q16513 984 aaKnown RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 KRT27Q7Z3Y8 459 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 AGGF1Q8N302 714 aaeCLIP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 JPH1Q9HDC5 661 aaPredicted RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 VCX3AQ9NNX9 186 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 PIH1D1Q9NWS0 290 aaKnown RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 DNAJC6O75061 913 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 SDC4P31431 198 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 POU5F1BQ06416 359 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 CUL3Q13618 768 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 FEZF2Q8TBJ5 459 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 FGD4Q96M96 766 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 LRRC4Q9HBW1 653 aa14.46□□□□□ -0.09
NFKB1-201ENST00000226574 GEMIN8Q9NWZ8 242 aaKnown RBP14.46□□□□□ -0.09
NFKB1-201ENST00000226574 SMG5Q9UPR3 1016 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms