RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ANKFY1Q9P2R3 1169 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 RGS17Q9UGC6 210 aaPredicted RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 ANAPC5Q9UJX4 755 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 NUB1Q9Y5A7 615 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 GAS2O43903 313 aaKnown RBP23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 RALAP11233 206 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 UBA1P22314 1058 aaKnown RBP23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 EDNRBP24530 442 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 ACTN3Q08043 901 aaPredicted RBP23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 QPCTQ16769 361 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 LRRC38Q5VT99 294 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 TAX1BP1Q86VP1 789 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 RELL1Q8IUW5 271 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 CCDC50Q8IVM0 306 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 RCOR2Q8IZ40 523 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 CCHCR1Q8TD31 782 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 INTS9Q9NV88 658 aaKnown RBP23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 CAPN7Q9Y6W3 813 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 A0A0G2JMZ2 1700 aa23.35■■□□□ 1.33
SMARCD2-201ENST00000225742 TLR3O15455 904 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 FARP2O94887 1054 aaPredicted RBP23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 TTC4O95801 387 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 ITGA8P53708 1063 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 CAPSQ13938 189 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 IER5Q5VY09 327 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 LBX2Q6XYB7 198 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 MMS22LQ6ZRQ5 1243 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 DEFB132Q7Z7B7 95 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 RBM41Q96IZ5 413 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 PCYT2Q99447 389 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 MRPL4Q9BYD3 311 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 ZNF518BQ9C0D4 1074 aa23.34■■□□□ 1.33
SMARCD2-201ENST00000225742 ASS1P00966 412 aaKnown RBP23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 MMP8P22894 467 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 ADCY8P40145 1251 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 STAT5BP51692 787 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 CNTN2Q02246 1040 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 TAP1Q03518 808 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 ZBTB41Q5SVQ8 909 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 PRAMEF18Q5VWM3 479 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 ZNF365Q70YC5 407 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 OR5B17Q8NGF7 314 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.33■■□□□ 1.332e-9■■□□□ 12.8
SMARCD2-201ENST00000225742 TCP11Q8WWU5 503 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 ATG4AQ8WYN0 398 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 CCDC114Q96M63 670 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 HERPUD2Q9BSE4 406 aa23.33■■□□□ 1.33
SMARCD2-201ENST00000225742 SMIM23A6NLE4 172 aa23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 TOM1L1O75674 476 aa23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 TAS2R40P59535 323 aa23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 MCL1Q07820 350 aa23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 LACTB2Q53H82 288 aaPredicted RBP23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 ZNF606Q8WXB4 792 aa23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 SEPT1Q8WYJ6 367 aa23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 R3HDM2Q9Y2K5 976 aaKnown RBP23.33■■□□□ 1.32
SMARCD2-201ENST00000225742 COPS2P61201 443 aa23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 CDCA2Q69YH5 1023 aaPredicted RBP23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 DRICH1Q6PGQ1 229 aaPredicted RBP23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 PHLDB2Q86SQ0 1253 aa23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 PASD1Q8IV76 773 aa23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 NSRP1Q9H0G5 558 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 CCDC113Q9H0I3 377 aa23.32■■□□□ 1.32
SMARCD2-201ENST00000225742 TMEM191CA6NGB0 347 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 NDC80O14777 642 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 CFHP08603 1231 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 TMEM191BP0C7N4 346 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 GHRP10912 638 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 PTPN7P35236 360 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 ITIH4Q14624 930 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 LLGL2Q6P1M3 1020 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 CCDC197Q8NCU1 140 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 IPO4Q8TEX9 1081 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 KDM4CQ9H3R0 1056 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 GOLGA6L7A0A1B0GV03 622 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 H0YHG0 523 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 EDN1P05305 212 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 CHKAP35790 457 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 MXD4Q14582 209 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 CNGA2Q16280 664 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 SGSM1Q2NKQ1 1148 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 UBAP2Q5T6F2 1119 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 METTL7BQ6UX53 244 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 PIGWQ7Z7B1 504 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 SUGP1Q8IWZ8 645 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 ANKS4BQ8N8V4 417 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 TMEM35BQ8NCS4 154 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 UHMK1Q8TAS1 419 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 MPHOSPH6Q99547 160 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 DDX23Q9BUQ8 820 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 C2orf40Q9H1Z8 148 aa23.31■■□□□ 1.32
SMARCD2-201ENST00000225742 OGTO15294 1046 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 FAM189A1O60320 539 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 MSCO60682 206 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 SLCO1A2P46721 670 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 FSTL1Q12841 308 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 KCNV1Q6PIU1 500 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 EXOC3L1Q86VI1 746 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 ZBTB8OSQ8IWT0 167 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 KAT2BQ92831 832 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 CCDC77Q9BR77 488 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms