RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ZNF18P17022 549 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
RPA3-201ENST00000223129 EEF1GP26641 437 aaKnown RBP16.15■□□□□ 0.18
RPA3-201ENST00000223129 ERVFC1P60507 584 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 FAM171A1Q5VUB5 890 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 CEP57Q86XR8 500 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 SEMA4DQ92854 862 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 PI4K2AQ9BTU6 479 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 TAB2Q9NYJ8 693 aa16.15■□□□□ 0.18
RPA3-201ENST00000223129 PUF60Q9UHX1 559 aaKnown RBP16.15■□□□□ 0.18
RPA3-201ENST00000223129 SF3B1O75533 1304 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPA3-201ENST00000223129 KPNA7A9QM74 516 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 PIK3CAP42336 1068 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 KRT31Q15323 416 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 DSTYKQ6XUX3 929 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.17
RPA3-201ENST00000223129 LRRC52Q8N7C0 313 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 RNF214Q8ND24 703 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 AUTS2Q8WXX7 1259 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 SENP8Q96LD8 212 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 ZNF560Q96MR9 790 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 XYLT2Q9H1B5 865 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 TIMM13Q9Y5L4 95 aaPredicted RBP16.14■□□□□ 0.17
RPA3-201ENST00000223129 CLSTN1O94985 981 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 SOD2P04179 222 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
RPA3-201ENST00000223129 IRS1P35568 1242 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 PNPLA4P41247 253 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPA3-201ENST00000223129 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 MAN2A1Q16706 1144 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 SV2CQ496J9 727 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 MIIPQ5JXC2 388 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 SPOPLQ6IQ16 392 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 SUSD3Q96L08 255 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 VPS16Q9H269 839 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 LZTS1Q9Y250 596 aa16.14■□□□□ 0.17
RPA3-201ENST00000223129 COL4A4P53420 1690 aaPredicted RBP16.13■□□□□ 0.17
RPA3-201ENST00000223129 C2CD2LO14523 706 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 TRAPPC3O43617 180 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 MYL7Q01449 175 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 UBE3AQ05086 875 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 VWA3BQ502W6 1294 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 RTP2Q5QGT7 225 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 TMC7Q7Z402 723 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 FBXL13Q8NEE6 735 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 MICAL1Q8TDZ2 1067 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 TCF25Q9BQ70 676 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 RAB20Q9NX57 234 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 VWA8A3KMH1 1905 aa16.13■□□□□ 0.17
RPA3-201ENST00000223129 M0QZQ0 153 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 PES1O00541 588 aaKnown RBP16.12■□□□□ 0.17
RPA3-201ENST00000223129 CYB561D2O14569 222 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 ELAVL2Q12926 359 aaKnown RBP16.12■□□□□ 0.17
RPA3-201ENST00000223129 SGSM1Q2NKQ1 1148 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 ZNF699Q32M78 642 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 USP41Q3LFD5 358 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 WDR72Q3MJ13 1102 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 GPR153Q6NV75 609 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 HERC2P3Q9BVR0 1158 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 ZBP1Q9H171 429 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 NDST4Q9H3R1 872 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 CHST7Q9NS84 486 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 NXF1Q9UBU9 619 aaKnown RBP16.12■□□□□ 0.17
RPA3-201ENST00000223129 LIMA1Q9UHB6 759 aaKnown RBP16.12■□□□□ 0.17
RPA3-201ENST00000223129 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 TRANK1O15050 2925 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 GOLGA6L19H0YKK7 550 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 FGFR3P22607 806 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 ATICP31939 592 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 CA8P35219 290 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 ADGRE1Q14246 886 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 PLPP4Q5VZY2 271 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 KIAA1841Q6NSI8 718 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 PRSS55Q6UWB4 352 aaPredicted RBP16.12■□□□□ 0.17
RPA3-201ENST00000223129 GAS2L3Q86XJ1 694 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 DEFB123Q8N688 67 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 POLIQ9UNA4 740 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 MYO7AQ13402 2215 aa16.12■□□□□ 0.17
RPA3-201ENST00000223129 CXCL14O95715 111 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 ASS1P00966 412 aaKnown RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 CTSAP10619 480 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 COPB1P53618 953 aaKnown RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 KIAA0319Q5VV43 1072 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 APTXQ7Z2E3 356 aaKnown RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 RIN2Q8WYP3 895 aaPredicted RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 HIDE1A8MVS5 230 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 N4BP1O75113 896 aaKnown RBP16.11■□□□□ 0.17
RPA3-201ENST00000223129 GLUD2P49448 558 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 DSG1Q02413 1049 aa16.11■□□□□ 0.17
RPA3-201ENST00000223129 LRMPQ12912 555 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms