RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.58□□□□□ -0.56
USP31-201ENST00000219689 CCR3P51677 355 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 AASDHQ4L235 1098 aaPredicted RBP11.58□□□□□ -0.56
USP31-201ENST00000219689 C11orf74Q86VG3 221 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 PROM2Q8N271 834 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 ZNF212Q9UDV6 495 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 MYOM2P54296 1465 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 CDC42BPBQ9Y5S2 1711 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 LRPAP1P30533 357 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 MTM1Q13496 603 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 KRT72Q14CN4 511 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 JAMLQ86YT9 394 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
USP31-201ENST00000219689 FSD1LQ9BXM9 530 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
USP31-201ENST00000219689 RNPEPL1Q9HAU8 725 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 ITIH6Q6UXX5 1313 aa11.58□□□□□ -0.56
USP31-201ENST00000219689 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 PEX1O43933 1283 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ZNF23P17027 643 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 NFKBIAP25963 317 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 CNGA2Q16280 664 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 C6orf183Q5T699 404 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ABCB10Q9NRK6 738 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 TMEM161AQ9NX61 479 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ITGA8P53708 1063 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ABCE1P61221 599 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 SHC4Q6S5L8 630 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 DDX50Q9BQ39 737 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 ADAM22Q9P0K1 906 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 COMMD3-BMI1R4GMX3 469 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 FLT4P35916 1363 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 DPPA5A6NC42 116 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 PGM3O95394 542 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 C19orf60Q96EN9 201 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 PLGRKTQ9HBL7 147 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 MAGEA4P43358 317 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 GCKRQ14397 625 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ZNF284Q2VY69 593 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 CKAP5Q14008 2032 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 EIF2AK2P19525 551 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 FUT11Q495W5 492 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ANKRD36BP1Q96IX9 119 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 KLHL8Q9P2G9 620 aaPredicted RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 RPS6KA5O75582 802 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 TBCKQ8TEA7 893 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 TIMMDC1Q9NPL8 285 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 RPRD1BQ9NQG5 326 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 TAGLN3Q9UI15 199 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 SNAP25P60880 206 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 RNF220Q5VTB9 566 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 PCNX4Q63HM2 1172 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 NEK5Q6P3R8 708 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 FAM118BQ9BPY3 351 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 MLPHQ9BV36 600 aaPredicted RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 PUS7LQ9H0K6 701 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 GOLPH3Q9H4A6 298 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 DNAAF2Q9NVR5 837 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 POGZQ7Z3K3 1410 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 REREQ9P2R6 1566 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 TFE3P19532 575 aaPredicted RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 PSMB9P28065 219 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ZBTB49Q6ZSB9 765 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ATL2Q8NHH9 583 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 EPS8L2Q9H6S3 715 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 RNMTO43148 476 aaKnown RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 FOSP01100 380 aaPredicted RBP11.57□□□□□ -0.56
USP31-201ENST00000219689 TRIM69Q86WT6 500 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 GATAD2AQ86YP4 633 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 CAVIN3Q969G5 261 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 ERP44Q9BS26 406 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 TMCO1Q9UM00 188 aa11.57□□□□□ -0.56
USP31-201ENST00000219689 FKBP6O75344 327 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 TTLL1O95922 423 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 MYBL2P10244 700 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 PHACTR1Q9C0D0 580 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 NFKBIL1Q9UBC1 381 aaPredicted RBP11.56□□□□□ -0.56
USP31-201ENST00000219689 CDY2AQ9Y6F7 541 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 CDY1Q9Y6F8 540 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 USP17L21D6R901 530 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 CBX6O95503 412 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 FAM69CQ0P6D2 419 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 TSC22D1Q15714 1073 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 NAB2Q15742 525 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 KBTBD2Q8IY47 623 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 RFFLQ8WZ73 363 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 SKA1Q96BD8 255 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 TRIM49D1C9J1S8 452 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 NR3C1P04150 777 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 OSBPP22059 807 aa11.56□□□□□ -0.56
USP31-201ENST00000219689 CSE1LP55060 971 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms