RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 CCDC110Q8TBZ0 833 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SHC3Q92529 594 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 TTC17Q96AE7 1141 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SPATA33Q96N06 139 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 C17orf75Q9HAS0 396 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 ETNK1Q9HBU6 452 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SEPT10Q9P0V9 454 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 I3L4J1 428 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 ATP13A4Q4VNC1 1196 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 PAF1Q8N7H5 531 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 CNKSR2Q8WXI2 1034 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 LBHD1Q9BQE6 289 aaPredicted RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 FAM49AQ9H0Q0 323 aaPredicted RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 ECT2Q9H8V3 914 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 GLI3P10071 1580 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 NCANO14594 1321 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 KLRG2A4D1S0 409 aaPredicted RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 CST8O60676 142 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 MAP3K6O95382 1288 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 GARTP22102 1010 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 ARL4CP56559 192 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 LGSNQ5TDP6 509 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 ZNF572Q7Z3I7 529 aaPredicted RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 SPATA21Q7Z572 469 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 MICAL1Q8TDZ2 1067 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 PRPF31Q8WWY3 499 aaKnown RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 STMN2Q93045 179 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 FAM129AQ9BZQ8 928 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 TRABDQ9H4I3 376 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 USP15Q9Y4E8 981 aaPredicted RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
CSTF1-201ENST00000217109 C1orf228Q6PIY5 440 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 SCYL3Q8IZE3 742 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 DMAC2Q9NW81 257 aa10.32□□□□□ -0.76
CSTF1-201ENST00000217109 H0Y3Z8 333 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 RASSF2P50749 326 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 MYL6P60660 151 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 DNAJC3Q13217 504 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 STAT4Q14765 748 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 HIF1AQ16665 826 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 QPCTQ16769 361 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 PPP1R2P3Q6NXS1 205 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 VSIG10LQ86VR7 867 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 RCOR2Q8IZ40 523 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 RASGEF1CQ8N431 466 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 FAF2Q96CS3 445 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 TMEM121Q9BTD3 319 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 SHOX2O60902 331 aaPredicted RBP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 PPFIA2O75334 1257 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 PROSCO94903 275 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 SUPT20HL2P0C7V6 817 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 ZSCAN5DPP0CG00 497 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 RGS7P49802 495 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 CDH6P55285 790 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 SLC8A3P57103 927 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 NME8Q8N427 588 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 A1CFQ9NQ94 594 aaKnown RBP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 EIF4E1BA6NMX2 242 aaKnown RBP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 FOXO6A8MYZ6 492 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 TTC4O95801 387 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 TCF7P36402 384 aaPredicted RBP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 SCTRP47872 440 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 RCN2Q14257 317 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 Q3C1V9 767 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 EMC1Q8N766 993 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 ZNF606Q8WXB4 792 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 ROPN1BQ9BZX4 212 aaPredicted RBP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 MIS12Q9H081 205 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 C10orf88Q9H8K7 445 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 ROPN1Q9HAT0 212 aaPredicted RBP10.31□□□□□ -0.76
CSTF1-201ENST00000217109 PHLPP1O60346 1717 aa10.31□□□□□ -0.76
CSTF1-201ENST00000217109 A6NJR5 290 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 PEX10O60683 326 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 PIAS1O75925 651 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ZBED1O96006 694 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 SURF1Q15526 300 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 TTC27Q6P3X3 843 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 NIPA1Q7RTP0 329 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 SLFN11Q7Z7L1 901 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 EIF1ADQ8N9N8 165 aaKnown RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 RDM1Q8NG50 284 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 PGK2P07205 417 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 MMP14P50281 582 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 HSD17B4P51659 736 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 EFNA5P52803 228 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 SGSM1Q2NKQ1 1148 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ABRAQ8N0Z2 381 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 PPM1NQ8N819 430 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 CCNYQ8ND76 341 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 OR6B3Q8NGW1 331 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 N4BP2L2Q92802 583 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms