RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CA12O43570 354 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 GPR32O75388 356 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 SASH3O75995 380 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 GNAT1P11488 350 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 TM4SF4P48230 202 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 FCGRTP55899 365 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 SLC7A5Q01650 507 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
VRK1-201ENST00000216639 SLC10A6Q3KNW5 377 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 SLC27A1Q6PCB7 646 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 MON1BQ7L1V2 547 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 KLHL7Q8IXQ5 586 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 C1orf127Q8N9H9 656 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 HDAC7Q8WUI4 952 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 LENG1Q96BZ8 264 aaPredicted RBP18.55■□□□□ 0.56
VRK1-201ENST00000216639 CHORDC1Q9UHD1 332 aaPredicted RBP18.55■□□□□ 0.56
VRK1-201ENST00000216639 ANAPC7Q9UJX3 599 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 ITGA11Q9UKX5 1188 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 CEP83Q9Y592 693 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 SCINQ9Y6U3 715 aa18.55■□□□□ 0.56
VRK1-201ENST00000216639 KPNA6O60684 536 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 IGHA2P01877 340 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 FGGP02679 453 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 ITGB3P05106 788 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 RRM1P23921 792 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 CTNNA2P26232 953 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 AXLP30530 894 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 SLC1A1P43005 524 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 TMEM62Q0P6H9 643 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 FSCN1Q16658 493 aaKnown RBP18.54■□□□□ 0.56
VRK1-201ENST00000216639 WDR72Q3MJ13 1102 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 SEL1L2Q5TEA6 688 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 SCARA3Q6AZY7 606 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 NOTUMQ6P988 496 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 SCARA5Q6ZMJ2 495 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 PASD1Q8IV76 773 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 PLVAPQ9BX97 442 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 ZNF518BQ9C0D4 1074 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 PLEKHA5Q9HAU0 1116 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 SIX4Q9UIU6 781 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 MYO1FO00160 1098 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 MED7O43513 233 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 HEXIM1O94992 359 aaKnown RBP18.54■□□□□ 0.56
VRK1-201ENST00000216639 WEE2P0C1S8 567 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 DARSP14868 501 aaKnown RBP18.54■□□□□ 0.56
VRK1-201ENST00000216639 HSPA6P17066 643 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 CTNNA1P35221 906 aaKnown RBP18.54■□□□□ 0.56
VRK1-201ENST00000216639 TNNT3P45378 269 aaPredicted RBP18.54■□□□□ 0.56
VRK1-201ENST00000216639 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
VRK1-201ENST00000216639 CASP8Q14790 479 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 TMEM35BQ8NCS4 154 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 CCDC26Q8TAB7 109 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 HHIPL1Q96JK4 782 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 C11orf70Q9BRQ4 267 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 AP1M1Q9BXS5 423 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 BCO2Q9BYV7 579 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 SLITRK6Q9H5Y7 841 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 VRTNQ9H8Y1 702 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 DERAQ9Y315 318 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 DOCK3Q8IZD9 2030 aa18.54■□□□□ 0.56
VRK1-201ENST00000216639 C17orf102A2RUQ5 167 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 DUSP11O75319 330 aaKnown RBP18.53■□□□□ 0.56
VRK1-201ENST00000216639 NPTXRO95502 500 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 ALDH1A1P00352 501 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 YARSP54577 528 aaKnown RBP18.53■□□□□ 0.56
VRK1-201ENST00000216639 ADAM17P78536 824 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 RBP5P82980 135 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 DCAF12L1Q5VU92 463 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 MFSD14CQ5VZR4 134 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 C7orf31Q8N865 590 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 ALG3Q92685 438 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 CD101Q93033 1021 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 OSMRQ99650 979 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 FAM124BQ9H5Z6 455 aaPredicted RBP18.53■□□□□ 0.56
VRK1-201ENST00000216639 VIPAS39Q9H9C1 493 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 CYP3A43Q9HB55 503 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 PCDHGC3Q9UN70 934 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 PCDHA3Q9Y5H8 950 aa18.53■□□□□ 0.56
VRK1-201ENST00000216639 CALB1P05937 261 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 PAEPP09466 180 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 FGFR4P22455 802 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 EIF4BP23588 611 aaKnown RBP18.52■□□□□ 0.56
VRK1-201ENST00000216639 PLA2G4AP47712 749 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 EPHB4P54760 987 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 BEX3Q00994 111 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 GUCY2DQ02846 1103 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 ZNF394Q53GI3 561 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 RUFY4Q6ZNE9 571 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 MMS22LQ6ZRQ5 1243 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 MAATS1Q7Z4T9 603 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 NME8Q8N427 588 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 TTC39CQ8N584 583 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 DNAJB3Q8WWF6 145 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 KIF12Q96FN5 646 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 BTBD6Q96KE9 485 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 GDF3Q9NR23 364 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 PARVAQ9NVD7 372 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 DPP3Q9NY33 737 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 LCMT1Q9UIC8 334 aa18.52■□□□□ 0.56
VRK1-201ENST00000216639 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms