RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 TNNC2P02585 160 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 EDN1P05305 212 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 PRLRP16471 622 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ITIH3Q06033 890 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 FAM110CQ1W6H9 321 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ZACNQ401N2 412 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF484Q5JVG2 852 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 TAPT1Q6NXT6 567 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ZPBP2Q6X784 338 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 FAM71AQ8IYT1 594 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 IFT81Q8WYA0 676 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 SHC3Q92529 594 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 KRT12Q99456 494 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 CGRRF1Q99675 332 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 SH3GL2Q99962 352 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 LRRC1Q9BTT6 524 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 AP1M1Q9BXS5 423 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ABHD16BQ9H3Z7 469 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 RPF1Q9H9Y2 349 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 INTUQ9ULD6 942 aa9.49□□□□□ -0.89
MTHFD1-201ENST00000216605 ZSCAN9O15535 394 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 THAP12O43422 761 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 RTN2O75298 545 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 SNAI1O95863 264 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 TPP2P29144 1249 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 NOP14P78316 857 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 DBN1Q16643 649 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 DGKDQ16760 1214 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 CRELD2Q6UXH1 353 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 ENOSF1Q7L5Y1 443 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 RHOT2Q8IXI1 618 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 GSPT2Q8IYD1 628 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 PPTC7Q8NI37 304 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 CPB2Q96IY4 423 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 RBM12Q9NTZ6 932 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 ABT1Q9ULW3 272 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 MAGEB2O15479 319 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 ASAP2O43150 1006 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 MSCO60682 206 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 SMPD1P17405 629 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 EPHB4P54760 987 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 BPIFB4P59827 614 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 C2CD6Q53TS8 623 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 EEF1DP3Q658K8 133 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 MPZL3Q6UWV2 235 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 C3orf20Q8ND61 904 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 NPLOC4Q8TAT6 608 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 CPA5Q8WXQ8 436 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 ANKRD36BP1Q96IX9 119 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 SETD4Q9NVD3 440 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC45A1Q9Y2W3 748 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 COQ4Q9Y3A0 265 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 PTPRJQ12913 1337 aa9.48□□□□□ -0.89
MTHFD1-201ENST00000216605 KRIT1O00522 736 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ACKR2O00590 384 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ZEB2O60315 1214 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 FGFR4P22455 802 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 RAB27AP51159 221 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 TNNC1P63316 161 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 SKOR1P84550 965 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CDR2Q01850 454 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 SNX1Q13596 522 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 LLGL1Q15334 1064 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CST9Q5W186 159 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 C16orf87Q6PH81 154 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ABRAQ8N0Z2 381 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 TMEM174Q8WUU8 243 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 KAT2BQ92831 832 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 FAM81BQ96LP2 452 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 AGAP3Q96P47 875 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 PCDHB18PQ96TA0 734 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 UTP6Q9NYH9 597 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 RNF14Q9UBS8 474 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 MORF4L1Q9UBU8 362 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CAPN7Q9Y6W3 813 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ZBTB42B2RXF5 422 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ZC3H11AO75152 810 aaKnown RBP eCLIP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 C4BPAP04003 597 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CXCL8P10145 99 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CD19P15391 556 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 IBSPP21815 317 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 GNA15P30679 374 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 MYL6P60660 151 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 GCNT1Q02742 428 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF211Q13398 564 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CUL2Q13617 745 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 FBXW10Q5XX13 1052 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 BRSK2Q8IWQ3 736 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 LENG1Q96BZ8 264 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 PBKQ96KB5 322 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 CABS1Q96KC9 395 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
MTHFD1-201ENST00000216605 ADPGKQ9BRR6 497 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms