RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 EP400NLQ6ZTU2 488 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 TMEM130Q8N3G9 435 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 CKAP2Q8WWK9 683 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 CCDC134Q9H6E4 229 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 TMEM8AQ9HCN3 771 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 SUFUQ9UMX1 484 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 RASA4BC9J798 803 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 RASA4O43374 803 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 ZNF862O60290 1169 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 DIAPH2O60879 1101 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 UNGP13051 313 aaPredicted RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 ATF7P17544 494 aaPredicted RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 NCKAP1LP55160 1127 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 SYCP2LQ5T4T6 812 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 C12orf50Q8NA57 414 aaPredicted RBP16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 RUNDC3BQ96NL0 473 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 PXMP2Q9NR77 195 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 WHRNQ9P202 907 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 UVRAGQ9P2Y5 699 aa16.81■□□□□ 0.28
SNAPC1-201ENST00000216294 TNNI1P19237 187 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 ITIH2P19823 946 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 PAX7P23759 505 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 COPS2P61201 443 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 CYP24A1Q07973 514 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 ZNF394Q53GI3 561 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 MIS18BP1Q6P0N0 1132 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 SAYSD1Q9NPB0 183 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 GPC3P51654 580 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 ARHGEF16Q5VV41 709 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 KCTD17Q8N5Z5 321 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 SERPINB12Q96P63 405 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 RBM15Q96T37 977 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 DNPEPQ9ULA0 475 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 CEP83Q9Y592 693 aa16.8■□□□□ 0.28
SNAPC1-201ENST00000216294 WDR91A4D1P6 747 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 P4HA2O15460 535 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 SUN1O94901 812 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TAC1P20366 129 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 NLRP11P59045 1033 aaKnown RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 NOP14P78316 857 aaKnown RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 PTK6Q13882 451 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 GALNTL6Q49A17 601 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TLDC1Q6P9B6 456 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TMEM270Q6UE05 265 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 ANKMY2Q8IV38 441 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 ZNF214Q9UL59 606 aaPredicted RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 WDR81Q562E7 1941 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 A0A1W2PPM1 405 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 FGFR1P11362 822 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TARSP26639 723 aaKnown RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 GCAP28676 217 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 NRLP54845 237 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 DMP1Q13316 513 aaPredicted RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 TCEAL1Q15170 157 aa16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 ROPN1BQ9BZX4 212 aaPredicted RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 STMN4Q9H169 189 aaPredicted RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 ROPN1Q9HAT0 212 aaPredicted RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 ALG13Q9NP73 1137 aaKnown RBP16.79■□□□□ 0.28
SNAPC1-201ENST00000216294 NSFP46459 744 aaKnown RBP16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 BNIP1Q12981 228 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 EFTUD2Q15029 972 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 FMNL3Q8IVF7 1028 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 C12orf42Q96LP6 360 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 KLF6Q99612 283 aaPredicted RBP16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 OSBPL8Q9BZF1 889 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 HAPLN2Q9GZV7 340 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 MYLK2Q9H1R3 596 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 APOBEC3GQ9HC16 384 aaKnown RBP16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 MUTP22033 750 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 MYBPC2Q14324 1141 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 CLUL1Q15846 466 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 SWSAP1Q6NVH7 229 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 ZNF449Q6P9G9 518 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 C12orf56Q8IXR9 622 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 P3H4Q92791 437 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 KIFAP3Q92845 792 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 UTP4Q969X6 686 aaKnown RBP16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 PITPNM3Q9BZ71 974 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 ETNK1Q9HBU6 452 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 HAO1Q9UJM8 370 aa16.78■□□□□ 0.28
SNAPC1-201ENST00000216294 PEX10O60683 326 aa16.77■□□□□ 0.28
SNAPC1-201ENST00000216294 GAS8O95995 478 aa16.77■□□□□ 0.28
SNAPC1-201ENST00000216294 IFNB1P01574 187 aa16.77■□□□□ 0.28
SNAPC1-201ENST00000216294 MAGEA4P43358 317 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms