RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ODC1P11926 461 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 TNNC1P63316 161 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 KRT31Q15323 416 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 USP41Q3LFD5 358 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 APPL2Q8NEU8 664 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 CXorf38Q8TB03 319 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 BCL7CQ8WUZ0 217 aaPredicted RBP21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 SUSD3Q96L08 255 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 HERC2P3Q9BVR0 1158 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 NDST4Q9H3R1 872 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 ALG13Q9NP73 1137 aaKnown RBP21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 RAB20Q9NX57 234 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 LIMA1Q9UHB6 759 aaKnown RBP21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 DSEQ9UL01 958 aa21.71■■□□□ 1.07
RHBDD3-201ENST00000216085 F8W810 466 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 LPXNO60711 386 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 CST3P01034 146 aaPredicted RBP21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 URODP06132 367 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 AARSP49588 968 aaKnown RBP eCLIP21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 MYL6P60660 151 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 FKBP15Q5T1M5 1219 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 FAM171A1Q5VUB5 890 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 PDXDC1Q6P996 788 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 VPS52Q8N1B4 723 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 TAS1R2Q8TE23 839 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 POF1BQ8WVV4 589 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 TLR9Q9NR96 1032 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 TAB2Q9NYJ8 693 aa21.7■■□□□ 1.06
RHBDD3-201ENST00000216085 HUS1O60921 280 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 BRCC3P46736 316 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 FILIP1LQ4L180 1135 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 TIGD5Q53EQ6 642 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 ZNF667Q5HYK9 610 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 PDE12Q6L8Q7 609 aaKnown RBP21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 TMEM130Q8N3G9 435 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 SPPL3Q8TCT6 385 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 VRTNQ9H8Y1 702 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 ENTPD7Q9NQZ7 604 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 COQ4Q9Y3A0 265 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 GTPBP10A4D1E9 387 aaKnown RBP21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 VNN1O95497 513 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 GLUD2P49448 558 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 WDR72Q3MJ13 1102 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 TMC7Q7Z402 723 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 METTL23Q86XA0 190 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 CEP57Q86XR8 500 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 RNF214Q8ND24 703 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 GDPD5Q8WTR4 605 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 SENP8Q96LD8 212 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 TTPALQ9BTX7 342 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 GPR62Q9BZJ7 368 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 HSD3B7Q9H2F3 369 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 NGRNQ9NPE2 291 aaKnown RBP21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 GDAP2Q9NXN4 497 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 PCDHB8Q9UN66 801 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 SNX9Q9Y5X1 595 aa21.69■■□□□ 1.06
RHBDD3-201ENST00000216085 M0QZQ0 153 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 CYB561D2O14569 222 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 ASS1P00966 412 aaKnown RBP21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 SERPINC1P01008 464 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 CA8P35219 290 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 COPB1P53618 953 aaKnown RBP21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 NOP14P78316 857 aaKnown RBP21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 CREMQ03060 361 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 GBP6Q6ZN66 633 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 MICAL1Q8TDZ2 1067 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 MMS19Q96T76 1030 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 TCF25Q9BQ70 676 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 VPS16Q9H269 839 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 TTYH1Q9H313 450 aaPredicted RBP21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 GCNT4Q9P109 453 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 CHD7Q9P2D1 2997 aa21.68■■□□□ 1.06
RHBDD3-201ENST00000216085 I3L4J1 428 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 SPTLC1O15269 473 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 GRM6O15303 877 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 CD300LGQ6UXG3 332 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 GPR65Q8IYL9 337 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 RNF168Q8IYW5 571 aaPredicted RBP21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 TOP6BLQ8N6T0 577 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 ZBP1Q9H171 429 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 XYLT2Q9H1B5 865 aa21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 MRPL17Q9NRX2 175 aaKnown RBP21.67■■□□□ 1.06
RHBDD3-201ENST00000216085 CTSAP10619 480 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 ATP1A3P13637 1013 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 TYMPP19971 482 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 SMC1AQ14683 1233 aaKnown RBP21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 MIIPQ5JXC2 388 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 ANKS3Q6ZW76 656 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 DPH6Q7L8W6 267 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 TMEM86AQ8N2M4 240 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 PPP2R3CQ969Q6 453 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 FAXDC2Q96IV6 333 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 NXF1Q9UBU9 619 aaKnown RBP21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 SCN1AP35498 2009 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 LRRC10BA6NIK2 292 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 EFEMP2O95967 443 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 FGFR3P22607 806 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 DSG1Q02413 1049 aa21.66■■□□□ 1.06
RHBDD3-201ENST00000216085 YWHAHQ04917 246 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms