RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 INPPL1O15357 1258 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 ZSCAN12O43309 604 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 ZNF500O60304 480 aaPredicted RBP17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 OFD1O75665 1012 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 LCA5LO95447 670 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 CCDC175P0C221 793 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 KRT5P13647 590 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 P4HA1P13674 534 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 RFC2P35250 354 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 SCNN1GP51170 649 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 NAB2Q15742 525 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 UBR7Q8N806 425 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 BCO2Q9BYV7 579 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 ELAC1Q9H777 363 aaKnown RBP17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 SPTLC3Q9NUV7 552 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 PCDHB4Q9Y5E5 795 aa17.09■□□□□ 0.33
SNRPD3-201ENST00000215829 KIAA0355O15063 1070 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 CCP110O43303 1012 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 TIMP1P01033 207 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 KRT83P78385 493 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 TCTN1Q2MV58 587 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 VPS36Q86VN1 386 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 ACRBPQ8NEB7 543 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 CISHQ9NSE2 258 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 ADAMTS1Q9UHI8 967 aa17.08■□□□□ 0.33
SNRPD3-201ENST00000215829 SCN1AP35498 2009 aa17.08■□□□□ 0.32
SNRPD3-201ENST00000215829 TRIM43BA6NCK2 446 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 USP27XA6NNY8 438 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 IPO7O95373 1038 aaKnown RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 WEE2P0C1S8 567 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 PNPLA4P41247 253 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 TNNC1P63316 161 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 SPA17Q15506 151 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 SLC18A3Q16572 532 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 TMEM270Q6UE05 265 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 SLC47A2Q86VL8 602 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 TRIM43Q96BQ3 446 aaPredicted RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 ZNF560Q96MR9 790 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 SYT11Q9BT88 431 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 CYP3A43Q9HB55 503 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 REXO2Q9Y3B8 237 aaKnown RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 A0A087X0T9 212 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 ZNF263O14978 683 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 FAM228BP0C875 321 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 CYP11B1P15538 503 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 BPIFB4P59827 614 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 GRIK3Q13003 919 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 BMS1Q14692 1282 aaKnown RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 GLB1LQ6UWU2 654 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 EPS8L1Q8TE68 723 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 AGPAT1Q99943 283 aa17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 FAM124BQ9H5Z6 455 aaPredicted RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
SNRPD3-201ENST00000215829 POMCP01189 267 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 CD58P19256 250 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 TAF6P49848 677 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 ZNF132P52740 706 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 CYP27A1Q02318 531 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 REXO1L1PQ8IX06 675 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 RBBP8NLQ8NC74 664 aaPredicted RBP17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 SLC30A5Q8TAD4 765 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 OLIG1Q8TAK6 271 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 PPP1R13BQ96KQ4 1090 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 ACP6Q9NPH0 428 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 NOCTQ9UK39 431 aaKnown RBP17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 PCDHB7Q9Y5E2 793 aa17.06■□□□□ 0.32
SNRPD3-201ENST00000215829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 KPNA7A9QM74 516 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 DDX3XO00571 662 aaKnown RBP eCLIP17.05■□□□□ 0.322e-16■■□□□ 13.5
SNRPD3-201ENST00000215829 TNFAIP3P21580 790 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 ITGB8P26012 769 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 RAP1GAPP47736 663 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 PDE6CP51160 858 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 CDH8P55286 799 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 CLLU1OSQ5K130 101 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 CNKSR3Q6P9H4 555 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 SLC20A1Q8WUM9 679 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 VWCEQ96DN2 955 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 MMS19Q96T76 1030 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 SDCBP2Q9H190 292 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 GDAP2Q9NXN4 497 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 SNX9Q9Y5X1 595 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 TDRD15B5MCY1 1934 aaKnown RBP17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 FGFR1P11362 822 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 RAG1P15918 1043 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 LILRA4P59901 499 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms