RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ZNF560Q96MR9 790 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 PCIF1Q9H4Z3 704 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 DMAC2Q9NW81 257 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 TRAF3IP3Q9Y228 551 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 GOLGA8IPA6NC78 632 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 GOLGA8JA6NMD2 632 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 I3L4J1 428 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 DLL1O00548 723 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 KINO60870 393 aaKnown RBP18.82■□□□□ 0.6
MRPL28-201ENST00000199706 CYP11A1P05108 521 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 WNT7BP56706 349 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 UBE2HP62256 183 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 ENPEPQ07075 957 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 PSMD6Q15008 389 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 GPR149Q86SP6 731 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 CXorf38Q8TB03 319 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 MFSD14AQ96MC6 490 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 PHF7Q9BWX1 381 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-201ENST00000199706 INTS13Q9NVM9 706 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 DSEQ9UL01 958 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 C2orf16Q68DN1 1984 aa18.82■□□□□ 0.6
MRPL28-201ENST00000199706 MAPK13O15264 365 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 HNRNPA1P09651 372 aaKnown RBP eCLIP18.81■□□□□ 0.6
MRPL28-201ENST00000199706 ODC1P11926 461 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 RPL17P18621 184 aaKnown RBP18.81■□□□□ 0.6
MRPL28-201ENST00000199706 TAF6P49848 677 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 GUCY2FP51841 1108 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 TFAMQ00059 246 aaKnown RBP18.81■□□□□ 0.6
MRPL28-201ENST00000199706 CYP24A1Q07973 514 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 UVSSAQ2YD98 709 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 SV2CQ496J9 727 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 TPGS2Q68CL5 300 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 C1orf127Q8N9H9 656 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 KREMEN2Q8NCW0 462 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 SPATA18Q8TC71 538 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 PDE11AQ9HCR9 933 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 CDY1Q9Y6F8 540 aa18.81■□□□□ 0.6
MRPL28-201ENST00000199706 OR6C75A6NL08 312 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 TNFRSF10AO00220 468 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 PPEF2O14830 753 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 CALUO43852 315 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-201ENST00000199706 ZMYND10O75800 440 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 ABLIM3O94929 683 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 OR1D2P34982 312 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 CYP2J2P51589 502 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 CLDN10P78369 228 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-201ENST00000199706 PNOCQ13519 176 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 DUOXA2Q1HG44 320 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 ATAT1Q5SQI0 421 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 ZNF461Q8TAF7 563 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 ANKRD36BP1Q96IX9 119 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
MRPL28-201ENST00000199706 LOC730098B7Z3J9 87 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 CLIC2O15247 247 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 SPTLC1O15269 473 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 ADAM12O43184 909 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 EXOC3O60645 756 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 NR3C1P04150 777 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 TMEM191BP0C7N4 346 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 AP3M2P53677 418 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 RBP5P82980 135 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 ROR1Q01973 937 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 EDRF1Q3B7T1 1238 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 ZCWPW2Q504Y3 356 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 RARS2Q5T160 578 aaKnown RBP18.79■□□□□ 0.6
MRPL28-201ENST00000199706 LIN9Q5TKA1 542 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 ZNF658Q5TYW1 1059 aaPredicted RBP18.79■□□□□ 0.6
MRPL28-201ENST00000199706 RSPO2Q6UXX9 243 aaPredicted RBP18.79■□□□□ 0.6
MRPL28-201ENST00000199706 USP37Q86T82 979 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 PALB2Q86YC2 1186 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 GJD3Q8N144 294 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 SMARCE1Q969G3 411 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 BORCS6Q96GS4 357 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 SENP8Q96LD8 212 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 CGRRF1Q99675 332 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 MTMR12Q9C0I1 747 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 GDAP2Q9NXN4 497 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
MRPL28-201ENST00000199706 TNNC2P02585 160 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 ITGB3P05106 788 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 ATF2P15336 505 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 RPL13P26373 211 aaKnown RBP18.78■□□□□ 0.6
MRPL28-201ENST00000199706 PPP1R2P41236 205 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 MCCD1P59942 119 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-201ENST00000199706 CTXN3Q4LDR2 81 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 OVOS1Q6IE37 1185 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 DSTYKQ6XUX3 929 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 CCDC149Q6ZUS6 474 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 ZNF707Q96C28 371 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-201ENST00000199706 NECAB3Q96P71 396 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-201ENST00000199706 FNBP1Q96RU3 617 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 PRKD2Q9BZL6 878 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 SIX4Q9UIU6 781 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 PCDHA5Q9Y5H7 936 aa18.78■□□□□ 0.6
MRPL28-201ENST00000199706 PTPRJQ12913 1337 aa18.77■□□□□ 0.6
MRPL28-201ENST00000199706 SPDYE4A6NLX3 237 aa18.77■□□□□ 0.6
MRPL28-201ENST00000199706 KPNA7A9QM74 516 aa18.77■□□□□ 0.6
MRPL28-201ENST00000199706 GADD45BO75293 160 aaPredicted RBP18.77■□□□□ 0.6
MRPL28-201ENST00000199706 POLR2BP30876 1174 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms