RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 JAMLQ86YT9 394 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 LRRC8CQ8TDW0 803 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 FRMPD4Q14CM0 1322 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 MIF4GDA9UHW6 222 aaKnown RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.363e-13■■■■■ 43.3
CHPF2-201ENST00000035307 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 KRT10P13645 584 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 BRAFP15056 766 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 GCLCP48506 637 aaPredicted RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 MYL6P60660 151 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 PSMC1P62191 440 aaKnown RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 SLC29A2Q14542 456 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 TMEM130Q8N3G9 435 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 FBXO25Q8TCJ0 367 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 SALL4Q9UJQ4 1053 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 DCTN4Q9UJW0 460 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
CHPF2-201ENST00000035307 KNL1Q8NG31 2342 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 SPATA31C2B4DYI2 1134 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 F8VZ95 297 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 P4HA1P13674 534 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 GUCY2CP25092 1073 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.36
CHPF2-201ENST00000035307 HSD17B3P37058 310 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 FLT3LGP49771 235 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 NOP14P78316 857 aaKnown RBP12.77□□□□□ -0.36
CHPF2-201ENST00000035307 FAM182AQ5T1J6 154 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 LLGL2Q6P1M3 1020 aa12.77□□□□□ -0.36
CHPF2-201ENST00000035307 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.36
CHPF2-201ENST00000035307 A6NNZ2 444 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 PPP1R37O75864 691 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 PCK1P35558 622 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 TAF12Q16514 161 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 DAW1Q8N136 415 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 KLHL29Q96CT2 875 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 UBR3Q6ZT12 1888 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 INHBAP08476 426 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 GJA5P36382 358 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 PBX1P40424 430 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 CACNB2Q08289 660 aaPredicted RBP12.77□□□□□ -0.37
CHPF2-201ENST00000035307 GEN1Q17RS7 908 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 SRLQ86TD4 932 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 ZBED8Q8IZ13 594 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 PYROXD1Q8WU10 500 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 MCEEQ96PE7 176 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 KCNG1Q9UIX4 513 aa12.77□□□□□ -0.37
CHPF2-201ENST00000035307 A0A087WUV0 522 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 A0A0G2JLL6 359 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 CCDC78A2IDD5 438 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 M0QYV0 167 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 OAZ1P54368 228 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 PSMD6Q15008 389 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 GRIK4Q16099 956 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 CELF3Q5SZQ8 465 aaKnown RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 C6orf163Q5TEZ5 329 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 IZUMO3Q5VZ72 239 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 DSTYKQ6XUX3 929 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 PRRT2Q7Z6L0 340 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 MMGT1Q8N4V1 131 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 TMEM161BQ8NDZ6 487 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 ACAP3Q96P50 834 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 CCT8L2Q96SF2 557 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 OLFML3Q9NRN5 406 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 PCNTO95613 3336 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 H0Y3Z8 333 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 DHX15O43143 795 aaKnown RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 RTN2O75298 545 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 UBE4BO95155 1302 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 RRM1P23921 792 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 ALCAMQ13740 583 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 CAPSQ13938 189 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 IER5Q5VY09 327 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 C4orf33Q8N1A6 199 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 TTC17Q96AE7 1141 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 ZIC5Q96T25 663 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms