RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 DCAF12L1Q5VU92 463 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 HDAC7Q8WUI4 952 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 ALG3Q92685 438 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 UBXN6Q9BZV1 441 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 CYP3A43Q9HB55 503 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
RTFDC1-201ENST00000023939 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
RTFDC1-201ENST00000023939 CCDC66A2RUB6 948 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 ATMINO43313 823 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 ALDH1A1P00352 501 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 CTGFP29279 349 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 CTNNA1P35221 906 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 FCGRTP55899 365 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PTP4A2Q12974 167 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 MESDQ14696 234 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 TMEM132DQ14C87 1099 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 FSCN1Q16658 493 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 SLC27A1Q6PCB7 646 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 NME8Q8N427 588 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 EIF1ADQ8N9N8 165 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 CPA5Q8WXQ8 436 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 LENG1Q96BZ8 264 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 FAM49AQ9H0Q0 323 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 GDF3Q9NR23 364 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 MYL3P08590 195 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PAEPP09466 180 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 GNAT1P11488 350 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 HSPA6P17066 643 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 RRM1P23921 792 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 SLC1A1P43005 524 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PLA2G4AP47712 749 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PURAQ00577 322 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 HIC1Q14526 733 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PTPROQ16827 1216 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PLEKHA7Q6IQ23 1121 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 RUFY4Q6ZNE9 571 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 AENQ8WTP8 325 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 RNPC3Q96LT9 517 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 SLITRK6Q9H5Y7 841 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 VIPAS39Q9H9C1 493 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 MRPL47Q9HD33 250 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 PCDHA3Q9Y5H8 950 aa15.26■□□□□ 0.03
RTFDC1-201ENST00000023939 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 BHMG1C9JSJ3 638 aaPredicted RBP15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 KRIT1O00522 736 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 CFHP08603 1231 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 P4HA1P13674 534 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 MMP8P22894 467 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 EIF4BP23588 611 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 GJA9P57773 515 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 RBP5P82980 135 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 NOTUMQ6P988 496 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 CATSPER4Q7RTX7 472 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 TSPAN18Q96SJ8 248 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 KRT12Q99456 494 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 ADAM22Q9P0K1 906 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 LCMT1Q9UIC8 334 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 SCINQ9Y6U3 715 aa15.25■□□□□ 0.03
RTFDC1-201ENST00000023939 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 CLSTN1O94985 981 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 ITGB3P05106 788 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 KRT19P08727 400 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 WEE2P0C1S8 567 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 CYBAP13498 195 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 CD58P19256 250 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 RNASE9P60153 205 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 IRX5P78411 483 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 CASP8Q14790 479 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 TMEM35BQ8NCS4 154 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 TRPV1Q8NER1 839 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 KRT35Q92764 455 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 LHX5Q9H2C1 402 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 CDHR5Q9HBB8 845 aa15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 CHORDC1Q9UHD1 332 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 ABT1Q9ULW3 272 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-201ENST00000023939 MGAMO43451 1857 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 TMEM110-MUSTN1A8MSY1 372 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SPOPO43791 374 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 ZMYND10O75800 440 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 NPTXRO95502 500 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 FGGP02679 453 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 CALB1P05937 261 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 GLI1P08151 1106 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 CRYBB1P53674 252 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 BEX3Q00994 111 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MAMLD1Q13495 774 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SNX17Q15036 470 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 WDR72Q3MJ13 1102 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SMC1BQ8NDV3 1235 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 DNAJB3Q8WWF6 145 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SNX27Q96L92 541 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 OSMRQ99650 979 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms