RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
CD9-201ENST00000009180 NUB1Q9Y5A7 615 aa10.85□□□□□ -0.67
CD9-201ENST00000009180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD9-201ENST00000009180 SF3B1O75533 1304 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD9-201ENST00000009180 TMEM265A0A087WTH1 108 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 BECN2A8MW95 431 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 AFPP02771 609 aaKnown RBP10.84□□□□□ -0.67
CD9-201ENST00000009180 RB1P06400 928 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 ZNF18P17022 549 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 CA8P35219 290 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 IRS1P35568 1242 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 FMO5P49326 533 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD9-201ENST00000009180 TAF6P49848 677 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 AP3M2P53677 418 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 LILRA4P59901 499 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 ERVFC1P60507 584 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 PLCB3Q01970 1234 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 ENPEPQ07075 957 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 KCNH2Q12809 1159 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 TRPC3Q13507 836 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 CAMK1Q14012 370 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 KRT31Q15323 416 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 MIIPQ5JXC2 388 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 RTP2Q5QGT7 225 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 PLPP4Q5VZY2 271 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 PRSS55Q6UWB4 352 aaPredicted RBP10.84□□□□□ -0.67
CD9-201ENST00000009180 DSTYKQ6XUX3 929 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 DDX53Q86TM3 631 aaKnown RBP10.84□□□□□ -0.67
CD9-201ENST00000009180 FAM114A1Q8IWE2 563 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 LRRC52Q8N7C0 313 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 POF1BQ8WVV4 589 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 HPDLQ96IR7 371 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 ZNF560Q96MR9 790 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 ARID3AQ99856 593 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 HERC2P3Q9BVR0 1158 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 XYLT2Q9H1B5 865 aa10.84□□□□□ -0.67
CD9-201ENST00000009180 TIMM13Q9Y5L4 95 aaPredicted RBP10.84□□□□□ -0.67
CD9-201ENST00000009180 PES1O00541 588 aaKnown RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 C2CD2LO14523 706 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 STX10O60499 249 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 GTF2H1P32780 548 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 KRT17Q04695 432 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 ADGRE1Q14246 886 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 MAN2A1Q16706 1144 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 ZNF699Q32M78 642 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 SV2CQ496J9 727 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 KRT39Q6A163 491 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 SCARA5Q6ZMJ2 495 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 GAS2L3Q86XJ1 694 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 CEP57Q86XR8 500 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 RNF168Q8IYW5 571 aaPredicted RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 DEFB123Q8N688 67 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 MYLIPQ8WY64 445 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 RIN2Q8WYP3 895 aaPredicted RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 SUSD3Q96L08 255 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 SENP8Q96LD8 212 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 TCF25Q9BQ70 676 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 TUBGCP2Q9BSJ2 902 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 ZBP1Q9H171 429 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 VPS16Q9H269 839 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 APOBEC3GQ9HC16 384 aaKnown RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 ENTPD7Q9NQZ7 604 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 R3HCC1Q9Y3T6 440 aaKnown RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.83□□□□□ -0.68
CD9-201ENST00000009180 SNX9Q9Y5X1 595 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 REV3LO60673 3130 aa10.83□□□□□ -0.68
CD9-201ENST00000009180 TSC2P49815 1807 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 SMTNL1A8MU46 457 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 HIDE1A8MVS5 230 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 KPNA7A9QM74 516 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 CYB561D2O14569 222 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 HCRTO43612 131 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 SOD2P04179 222 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 RPL17P18621 184 aaKnown RBP10.82□□□□□ -0.68
CD9-201ENST00000009180 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
CD9-201ENST00000009180 FGFR3P22607 806 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 PNPLA4P41247 253 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 RAP1GAPP47736 663 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 GLUD2P49448 558 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 COPB1P53618 953 aaKnown RBP10.82□□□□□ -0.68
CD9-201ENST00000009180 APBA1Q02410 837 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 LRMPQ12912 555 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 PTPN14Q15678 1187 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 PTPN21Q16825 1174 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 VWA3BQ502W6 1294 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
CD9-201ENST00000009180 TMC7Q7Z402 723 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 ADGRD2Q7Z7M1 963 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 OSTM1Q86WC4 334 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 FBXL13Q8NEE6 735 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 GUCD1Q96NT3 240 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 CRACR2AQ9BSW2 395 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 INTS2Q9H0H0 1204 aaKnown RBP10.82□□□□□ -0.68
CD9-201ENST00000009180 SDCBP2Q9H190 292 aa10.82□□□□□ -0.68
CD9-201ENST00000009180 SMYD3Q9H7B4 428 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms